Trachemys scripta elegans (red-eared slider): 117884362
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Entry
117884362 CDS
T07347
Symbol
CILP
Name
(RefSeq) cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tst04990
]
117884362 (CILP)
Domain-containing proteins not elsewhere classified [BR:
tst04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
117884362 (CILP)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
Ig_2
I-set
CarboxypepD_reg
TSP_1
ig
CarbopepD_reg_2
TSP1_spondin
TSP1_CFP_C
TSP1_CCN
V-set
Motif
Other DBs
NCBI-GeneID:
117884362
NCBI-ProteinID:
XP_034640597
LinkDB
All DBs
Position
10:complement(78888777..78908904)
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AA seq
1178 aa
AA seq
DB search
MIAARGWILSLLLLATTSVLSEGERVLKQSVSRLQPRQKPLTPFVKGNLANHGEWTTWFN
VDHPGGNGDHERLDAIRFYFRDKVCKRPTRIEARTTDWVPAQNTGQVVHASLQEGFWCLN
KEQPAGKTCLNYAVRFLCPIGSLLHDSKRFWSPWSKWSACSAECGKTGVQTRIRTCLAES
HLDLHCNEVTEEGRLCIGHSCSECNLTCSMGRVNAECDSCMCEEHVLHGMVSLADGAPAA
EATVYVQSENLKLLTESDSNGGFRIPGVCPDGKNILKIKKARYATVTVPIPESTKKSSII
HVHLKRADKPYIVKNPVDKVRRIGQNVILCCKAVGNPAPAQYLWYHNGTLLDSSVYKYNS
KLVLRNLKVDQAGEYFCKASNDAGSVKSQAAKLSVIASDEASCDPRPESYFIRLPHDCFQ
NATNSLYYDVGKCPANICAGKIDQGLQCKDRAAYCCGISKMEIREISCSGYTLPTKVAVE
CGCSVCTEIKMTVRGRAIAADNGEPIRFGHIYIGNNRISMTGYKGTFSVHVPADTERLVL
TFVDRLQKFVNTTKVLPFNKKGGAVFHEIKLLRKKAPVTLESSETNTIPLGDMEGDDPIA
ELEIPPNTFYRQNGEVYTGKVKASVTFLDPRNMSTATAAQSDLNYINEEGDMLPLHTYGM
FSMDFTDETATEFLNAGKVRVHLDSAQVRIPEHLQQMKLWSLNPETGLWEEEGDFKPDQS
TRRKREERIFLVGNMEIRERRLFNLDVPESRRCYVKVRAYRSERFLPSEQVEGAVISLIN
MEPASGYSSNPRAWGRFDSAVTGPNGACLPAFCDEQRPDAYSAYILASLEGEELEAVPSS
PRLNPNAVGVPQPYLNKLNYRRTDHVDPRIKKTAFSITVAKPSPSTAGESKGPIYASENL
RECEQAHYSAAHFRFYRVERDRYDYNTVPFNENDPMSWTEDYQAWWPNPMEYRACYMKVK
INGPQEVNIRSHNMGGTHPYTVGKLYGIRDVRTIQDMEQSDLSTVCLEFKCSGMLYDQDR
VDRTLVRIIPQGKCYRESVNSMLQEYLVNHPPLAVNNESGEYTMLAPLDPLGHNYGIYTV
TDQNPSIAKEIALGRCFDGTSDGTSRVMKSNIGIALTFNCVEREVAQQSLFQSLQNSPRR
RERTGIRRQQRDICIGQAKMRRVTQRRSSPRVQCTPTD
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcagcaagaggatggattctctcgctccttcttctggccaccacatctgttcta
agtgaaggtgagagggttctgaaacaatccgtcagcaggctccagcccagacagaaaccc
ctcactccctttgtaaagggcaacctagcaaatcacggggagtggaccacatggttcaat
gttgatcatccaggcggcaacggggatcacgaacgtttagacgccatcaggttttacttc
agggacaaggtgtgcaagagacccacgcgaattgaagcgcgaaccacagactgggttcct
gcccagaacacaggccaagtggtccacgctagcctacaggagggattctggtgtttgaat
aaggagcagccggcaggaaaaacctgtttgaattatgccgtacgtttcctgtgtcccata
gggtctttgctgcacgattcaaaaaggttttggtctccatggtcgaaatggagtgcgtgc
tcagcagaatgcggcaaaacgggtgtccagacccgtatcagaacctgcctggcagagagc
cacttggacctgcactgtaatgaagtgactgaggaagggcgactctgcattggacattct
tgttcagagtgcaacctcacttgctccatgggccgcgtgaatgcggagtgcgattcctgc
atgtgtgaggaacacgtactgcatgggatggtctcccttgcagacggcgcaccggctgct
gaagctactgtctacgtgcagtctgagaatctgaagctgttaacggagtccgatagcaac
ggagggtttaggattcctggagtgtgccccgacggcaaaaacattctgaaaataaaaaag
gccagatacgccactgtgactgtccccatacctgaaagcaccaagaaatcctcaataatc
catgtgcatctgaaaagagcagacaagccgtacatcgtaaagaatccggtggataaagtg
aggcgaatagggcaaaatgtgatactctgctgtaaagctgtagggaatccagcccctgct
cagtatctctggtaccacaatggaactttgctggattcctcagtgtacaaatataatagc
aagctggtgttaaggaacctgaaggtagaccaggcaggagagtacttctgcaaggcgagc
aatgatgcagggtctgtgaaatcccaagctgctaaactttctgtaatagcaagcgatgaa
gcttcctgcgatccaagacctgaaagctacttcatcagactcccacatgactgtttccaa
aacgcaactaactccttgtactacgacgttggtaaatgtccagcaaacatatgcgctgga
aagatagatcaaggactccagtgcaaagaccgtgctgcttactgctgtgggatctccaaa
atggaaataagagaaatatcgtgcagtggatacacccttcccactaaagttgctgtggaa
tgtggctgtagcgtgtgcactgagatcaagatgacagtccgggggagagccatagctgca
gataatggtgaaccaataaggtttggccatatatacatagggaacaacagaatcagcatg
actggctacaagggaaccttctctgtccacgtcccagcagacacagagaggctggttctt
acttttgtcgaccgcctacagaagtttgtgaacacgactaaagttttgcctttcaacaaa
aagggaggtgccgtgtttcacgagatcaagttactaagaaagaaagccccagttacgtta
gagtcctctgaaacgaacacgattcccttaggagacatggaaggggatgatccgatagct
gaactagaaattcctcccaatacgttttataggcagaatggtgaagtctacacaggcaaa
gtgaaagccagtgttacgtttctggacccaagaaatatgtcaacagctacagcagcacaa
agtgacctgaactacataaatgaggaaggcgacatgctcccgctgcacacatatggcatg
ttttccatggacttcactgatgaaacagccaccgagtttcttaatgcagggaaggtaagg
gttcacctggactctgcgcaggtcaggataccagaacacctgcagcagatgaagctttgg
tcactgaacccagagacaggattgtgggaggaagaaggggacttcaaacctgaccaaagc
acacgtcgcaaacgggaggaaagaattttcttggttgggaatatggagatcagagagagg
aggctcttcaacctagatgtcccagagagcagaaggtgttatgtcaaggtacgagcttac
agaagtgagagatttctgcccagcgaacaagttgagggggctgtgatttcccttataaac
atggagcctgcatcaggttattcatccaaccctagagcatggggacgctttgacagtgca
gtcactggtcccaacggggcttgcttaccagctttctgcgatgagcaacgtccagatgcc
tactcagcttatatcctggcaagcctggagggagaagaacttgaagctgtgccctcttct
cccagactcaaccctaacgccgtcggagtcccacagccatatctcaacaagctcaactac
aggaggacagatcacgtggatcctagaattaagaaaactgccttcagtatcacggtggcc
aaaccaagtccaagcacggcaggagagagcaaaggccccatctacgccagtgaaaaccta
agagaatgtgagcaagcacactacagtgccgctcatttcagattttacagagtagagaga
gaccggtatgattacaatacagttcccttcaatgaaaatgatccaatgagttggactgaa
gactaccaggcttggtggcccaacccaatggaatatagggcatgttatatgaaagtaaaa
attaacggaccccaagaggtgaacataagatctcacaacatgggtggcacgcatccatac
acagtcggcaagctttacggcatccgagatgtgcgcaccattcaagacatggagcaatca
gatctttccacagtgtgcctggaatttaaatgcagtggaatgctgtatgaccaagaccgt
gtagaccgtacactggtaagaatcattccccaaggaaagtgttacagagaaagtgttaat
agcatgctccaggaatatctagtgaaccaccccccacttgctgtaaataatgaatccggg
gagtacacaatgttggcacctcttgaccctcttggacataattatggaatctacacagtc
actgaccagaaccctagcatagccaaggaaatagctctgggtagatgtttcgatggcacg
tctgatggtacttcccgagttatgaagagcaacataggcatagcattaacttttaactgt
gttgaaagagaggtggcgcagcaaagcttattccagtctctgcagaattcacctaggcgg
agagaaagaacagggatcagaaggcaacaaagagacatctgcattggccaggccaagatg
agaagagttacccaacgcagaagttcaccaagagttcagtgtaccccaacagattag
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integrated database retrieval system
