Trachemys scripta elegans (red-eared slider): 117884407
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Entry
117884407 CDS
T07347
Name
(RefSeq) rho guanine nucleotide exchange factor 5-like
KO
K20684
Rho guanine nucleotide exchange factor 5
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117884407
Membrane trafficking [BR:
tst04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117884407
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_2
SH3_9
PH
SOS1_NGEF_PH
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
117884407
NCBI-ProteinID:
XP_034640676
LinkDB
All DBs
Position
1:128029772..128078216
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AA seq
2160 aa
AA seq
DB search
MKYLQPQGRQKNLNLIPIAEATAGAATGTGLKAKHWPKNQGYDTQQDVSLMESEEANGGD
PFPPANSSPTEENPDPTPAKRGHYATTESVEMSTELPGSAEGAQISIAQDPPRHLSAGES
AEMCGRSSNPVLSGLEQGERDLRHQRGLSEWEKDPAVQEISLERQRWDHASNSEQGKLAH
PESSQYSSFPNTVPQAIATHDKNPQVPAPALHIEFPQDQKQSLACHTAVPQAQHKETSMT
DTVPSQREPATKHFLVCKEVSEVHCKTETLHDDTTGDPPLPGLDVANGTIRELPPSTEAV
ARTDEEPSPGMDAVVRMNPMPSVNNDEKVGGLQGGGEDTDSSSSHHPPYPLLDDSQGNSQ
LTGGNADGKMVLSSHERGNNALATYQKTEVAARQSPSGSINLLLEEEKGADDGRAEGSTE
SPRECVFHILNAAKNTEQEEWQHEQLEWREEPEEGEQSEQKQPELEQEEPEWEKLEKEVK
PVQEEPVWDREDQKEKRWDELEQEPGREEAEQEAPPPALNPASPSLSKQNWDLRDEGECT
SSAEGTGLASLHQVSFSKDQHPGEDELSSIALKACIGGANVRAQPPAVITSESQNPVGGS
SMMHSPTCHISAHWGDVGVSDPSSFISFNGQDCEETCQDNRASNGEDGHSDEDGRTVQSF
DDGGAISPLCREVTSSGAGNPDSSGTLDPSSGARNLGSFGPTDPHPVAEKPAFPSHHYFT
LASPSEFNSAVSAPGPSQEDADERSQVSPVGCTDLDKAPVSVQDTSSQTSYLQEAASREG
ASVTTSTEGVQTPHGLLTPEKGFNEESSAQPSISKAFRSPPPQQSLPKDTDEVESTPAAP
VTMHLESSQAPDMALAPPNSLEKDQRHQKPPMRSFVFQGKEVEANVVHAAQHNPLLDESH
LSLEVEVLGTGSALNAVPQPPEQAVVLALEQSTQPPPPVPDADQLTHPPAPVPGSPLAPG
ATQLAHPPVLALSSPLAPVPDAEQLAHRPAPVPSSPLAPAPDADQLIHPLAPAPSLPLTP
APDADQLTHPPAPAPSSPPVPVYDITQLAHRLSPAPGSPLVPAPDTTQLAHPLAPAPSSP
LAPVPDADQLVHAPAPAPDSLPALVPDASQLAHSSVPLPSSPLAPEPDADQLAPPLAPAP
SSPLTPAPDADQLTHPLTPAPSSPLTPAPSSPLTPAPDADQLTHPLAPAPSSPLTPAPDA
DQLAPPLAPAPSSPLAPAPDADQLTHPLTPAPSSPLTPAPDADQLAPPLAPGSPLVPVPD
ATKPPASAPGSPLALLADAYQLLQSQSLVPDSNHPSAPAPDIDQPLPPVSNSTPPLNCVS
DSSQLLATAPNSSCPAQAPASVPDADSLAHALVPAPAVEDGEENPLLMQMTHEGVSGAQW
DPVISPTLDEVDTSDSGATSLAESSDFPTLENEAPMGHSDRSPKAMGQHLATHCGKSTPD
YTSRPSLGGWGTSTDSQNRNSAQPPPLLAFSNPIHFLQFSPPSPPAIRTLYRQDAVFDEP
QWDQAQAGPTSVDTRNTTAPAVMIEKAEGARTCKQKMEGQGEPLHLAAQVKEVAVKHALL
EKSSSWPDKKVIRVDMKELGLNSGSQENVIKHRAKSKDWHRQGLRKMSVLSDSLQEEGAH
KDQPTSLDTVIHREKKSADTLDNFKRRHSKLINSSRLLYQEYSDVALNKAIQSQKRADSL
AEDFELSSPSSPRLRRKVLSSQDSYLQRLSVSSNPSLWQDIPMIRGSRMLLNMSRDDQKL
QEAKFELILSEASYLRSLNVAVDHFQRSSELQALLTKQERKWLFSRLQEVRDVSASFLFE
LEEKFEENMFNFNVCDVALRHAPAFRKVYLPYVTNQTYQEQIFQRLMHRNAKFQQVLEKL
ESASVCQRLSLKSFLILPFQRITRLKLLLQNILKRTPPESDEEVQATQAYDALEKLIKDC
NENVQRMKSTEELIYLRQKIDFECKIFPLVSQSRRLVKCGELMTLDDNTLSPKWKLTTRH
IYLHLFNDCLLLSRPREGGRFVVFDHAAFSDVRGEKCEMKLHGTNKNLFRLFLLKNNQGK
SVQFLFRTETHSEKLRWISALAPPRGEPDLLENPDSPQVQCIRTYKARENDELDLEKADI
IMVMQNSNDGWMEGVKLSDGERGWFPSEHVEIISSKHARQMNLKEEQRVKNAKQQVFCKK
NT seq
6483 nt
NT seq
+upstream
nt +downstream
nt
atgaaataccttcagcctcagggaagacagaaaaacttaaacctgattccaattgcagaa
gcgacagcaggagcagctaccggaactgggctcaaagcaaagcactggcccaaaaatcaa
ggatatgacacccagcaggatgtctcattgatggaatctgaagaagccaatgggggagac
ccctttcccccagcaaacagcagccctactgaggaaaaccctgatcctacaccagccaaa
aggggacattatgccactactgagtctgtagagatgagcaccgagctgcctggctctgca
gaaggagcacagatctccattgcccaggatcctccaaggcatctctctgctggggaatca
gcagagatgtgtggcagatcctctaaccctgttctgtcaggactggaacaaggggagaga
gatctaaggcaccagagaggactctcagagtgggagaaagatcctgcagtacaagagata
tctttggaaagacagagatgggatcacgcctcgaactctgaacaggggaaattagctcat
cctgaaagcagtcagtattcttcctttcccaacacagtcccacaggcaatagccactcat
gacaaaaacccgcaggtaccggctccagcccttcatattgaatttcctcaggatcagaaa
cagtccctggcatgtcatactgctgtcccccaggcacagcataaggaaacctcaatgaca
gacacagttcccagccagagggaaccagccactaaacacttcctggtgtgtaaagaagtt
tcagaggttcattgcaagactgagactttgcatgatgacactactggagatccccccttg
ccggggttagacgtagcaaatgggaccatcagagagctcccaccaagtactgaagcagtg
gcaaggaccgacgaggagccatctcctgggatggatgcagtagtcaggatgaatcccatg
ccttctgtaaataatgatgaaaaagtgggaggcttgcagggagggggagaggatacagac
tcttcctcttcacatcacccaccctaccccttattggatgacagccaaggaaattcacag
ctgacaggaggaaatgcagatggaaagatggtcctatcatcccatgagagagggaacaat
gctttggccacataccagaaaacagaagtggctgctaggcaaagtccatctggttctata
aacctccttctggaggaggagaaaggagcagatgatggaagagcagaaggcagcactgaa
tctccaagagagtgcgtcttccacatactgaatgctgcaaaaaacacagagcaggaggag
tggcagcacgagcagctagaatggagggaggagcccgaagagggggagcagtcagagcag
aagcagccagagctggaacaggaggagccagaatgggagaagctagagaaggaagtgaaa
ccagtgcaggaggagccagtgtgggacagggaagatcagaaggaaaagaggtgggatgag
ctggaacaagagccagggagggaagaggcggagcaggaggctccaccaccagcactcaat
ccagcgtcaccttctctctccaagcaaaactgggacctccgtgatgagggggagtgcact
tcctcggctgagggaacagggctggcctctctgcaccaggtttcattctccaaagatcag
catcctggtgaggatgaactatccagcatagcgttgaaggcctgcattggaggagcaaat
gtaagagctcagccacctgctgtgataacgtccgaaagtcagaacccagtgggtgggagt
tccatgatgcactcccccacttgccacatctctgcgcactggggagacgtgggggtttct
gacccttccagcttcatttctttcaatggccaagattgtgaagaaacctgtcaggataac
agagccagtaatggtgaggatggccatagtgatgaagatggaaggacagtccagagcttt
gatgatggaggagccatctctccgttatgcagagaagtaacctcatctggtgcagggaac
ccagactcttctgggactctggacccttcttctggtgccaggaacttgggatcttttggt
cccacagatccccatcctgttgcagaaaaaccagcatttcccagtcatcattatttcact
ctagcctcgccatcagagttcaactcagcagtatcagcacctggcccatctcaggaggat
gctgatgaaagatcccaagtgagccctgtgggatgtactgacctggacaaagcaccagtc
tctgtacaggacacatccagccagacttcttacctgcaggaggcagcttctagggaagga
gcctcagtgaccaccagcacagagggtgtccagactccccatggtctgcttacacctgag
aagggctttaatgaagagtctagtgcccaaccttccatctccaaggctttcagaagtccc
cctccacagcagagcctgcccaaggacacagatgaagtagaatctactcctgcagctcca
gttacaatgcacttggagtcatcccaagcaccagacatggctcttgctcccccgaattcc
ctggagaaagaccagaggcaccaaaagcccccaatgagaagttttgttttccagggaaag
gaagtggaagcaaacgtcgttcacgcagcacaacacaaccctttacttgatgagtcacat
ttgagcttagaggtggaagtgctaggaacaggaagtgcccttaacgctgtaccgcagccc
ccagaacaagctgtagtccttgccctggagcagagcacacagcctcctcctcctgtgcct
gatgctgaccagctcacgcaccctccagctcctgtgcccggctcacctctggcccctggt
gccacccagcttgcccaccctccggtgcttgcgctcagctcacctctggcccccgtgcct
gacgccgagcaactcgcccaccgtccggctcctgtgcccagctcgcctctggcccctgca
ccggacgccgaccagctcatccaccctctggctcctgcgcccagcttacccctgactcct
gcacctgatgccgaccagctcacccaccctccagctcctgcacccagctcgcccccagtc
cctgtgtatgatatcacccaactcgcccaccgtctgtctcctgcgcccggctcacccctg
gttcctgcacctgataccacccagctcgcccaccctctggctcctgcacccagctcgccc
ttggcacctgtgcctgatgctgaccagctcgtccatgctccagctcctgcgcccgactcg
ctcccagcccttgtgcctgatgccagccagcttgcccactcttcagtacctttgcccagc
tcgcccctggcccctgaacctgacgccgaccagctcgccccccctctggctcctgcaccc
agctcacctctgactcctgcacctgacgccgaccagctcacccatcctctgactcctgca
cccagctcgcctctgactcctgcacccagctcgcctctgactcctgcacctgatgccgac
cagctcacccatcctctggctcctgcacccagctcgcctctgactcctgcacctgatgcc
gaccagctcgccccccctctggctcctgcacccagctcacctctggctcctgcacctgac
gccgaccagctcacccatcctctgactcctgcacccagctcgcctctgactcctgcacca
gatgctgatcagctcgccccccctctggctcctggctcacccctggttcctgtgcctgat
gccaccaagcctccagcttctgcacctggctcgcccctggctcttctggctgatgcctac
cagcttctccagtctcagtcccttgtgcctgactccaaccacccttcagcccctgcacct
gatattgaccagcctctgcctcctgtatctaactccactccacctctaaactgtgtatca
gattctagtcaattactggccactgcccccaattccagctgccctgcccaggctccagcc
tctgtgcctgatgctgacagccttgctcacgctctggtccctgcccctgctgtggaagat
ggagaagagaaccccctcctaatgcagatgacccacgagggagtgtctggtgcccagtgg
gatcctgtcatctcacctacactggatgaggtggacactagtgactcaggggccacttca
ttggccgagagctcagattttcccactttggagaatgaggcacccatgggccactctgac
agaagccctaaagcaatgggtcagcacctggctacacactgtggaaagtccacacctgac
tacacctccaggccctccctgggagggtggggaacatccacagactctcagaatagaaat
tcagcacagccacccccactactagctttctccaacccaatccacttcctgcagttcagc
cctccatcaccaccagccatcagaacactataccgacaggatgcagtcttcgatgagccc
cagtgggaccaggcacaggcaggccccactagcgtggatacgaggaacacaacagcccct
gcagtgatgatcgagaaagcagagggcgctaggacatgcaagcaaaagatggaagggcag
ggagaaccgcttcaccttgcggcccaggtgaaagaggtggccgtcaaacatgcactcttg
gagaagtcatcaagttggccagataaaaaagtcatcagggtggacatgaaggagctggga
ctcaattcagggagtcaggagaacgtgatcaaacaccgagcaaaaagcaaagactggcac
cggcagggcctgaggaagatgtcagtactgtcagacagcttacaagaggagggagcacac
aaggaccagccaaccagcttagacacagttatacatcgggagaagaaatctgcagacaca
ctggataatttcaagcgccgacactccaaactgatcaactcctcaaggttactctatcag
gaatacagcgatgtggctctgaacaaagcaatccagagccagaagagagcagattctttg
gcagaggacttcgaactgagctctccaagctccccaaggttacggaggaaagtgctgtct
tcgcaggactcgtatcttcaacgtctgtcagtctcatccaatccgtccctctggcaggac
atccccatgatccgaggaagcagaatgctgctgaacatgtcccgagatgatcagaaactg
caggaggccaagttcgagttgatcctgtcagaggcctcatacttgcgcagtttaaatgtg
gcagtggatcacttccagcgctcatcagaactccaggcactcctcaccaagcaggagcgc
aagtggcttttctcccgcctgcaggaagtgcgtgatgtcagtgccagtttcctcttcgag
ctggaggagaagtttgaggagaacatgttcaactttaacgtgtgtgacgtggctctgaga
catgcccctgcattccgcaaggtgtatctaccatacgtgacaaatcagacctaccaagag
cagattttccagaggctaatgcacagaaatgcaaagttccagcaagtcctggagaaactg
gaaagtgccagtgtgtgccagcgcctctccctcaaatccttcctcattctccccttccaa
cgcatcacccgactcaaactcctcctacagaatatattgaagagaaccccgcccgagtcg
gatgaagaagtgcaggccacacaggcttatgatgcactggagaagctcataaaggactgc
aacgaaaatgtccagcgcatgaagagcactgaggagttgatctacctaagacaaaagatt
gattttgagtgcaagatattcccactggtctcgcagtctaggcggctggtgaagtgtggt
gagctgatgacgttggacgacaacactctgagccccaagtggaaactcaccacccgccac
atctacctgcacctcttcaatgactgcctgctcctgtcccggcccagggagggtgggcgc
tttgtcgtgtttgatcatgctgcattttcagatgtacgtggggagaagtgtgagatgaag
ctgcacgggacaaacaaaaatcttttccgcctttttctccttaagaacaaccaagggaaa
agcgtgcaattcctctttcgtacagagacacacagtgagaagctgcggtggatctccgct
ctggcgccaccacgaggagaaccagatctcttagaaaaccctgactcacctcaggttcag
tgcatacggacatacaaagctcgggagaatgacgagctggatctggagaaagcagatatc
atcatggtcatgcagaacagcaacgacggctggatggaaggagtgaaactctcagatgga
gagagaggctggtttccctcagagcatgtggaaataatctccagcaaacacgcacgccag
atgaacctgaaggaggaacagcgtgtgaagaatgccaaacagcaggtcttctgcaagaaa
tag
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integrated database retrieval system
