Trachemys scripta elegans (red-eared slider): 117884445
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Entry
117884445 CDS
T07347
Symbol
MGRN1
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04120
Ubiquitin mediated proteolysis
tst04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117884445 (MGRN1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117884445 (MGRN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117884445 (MGRN1)
Enzymes [BR:
tst01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117884445 (MGRN1)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117884445 (MGRN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
117884445
NCBI-ProteinID:
XP_034640739
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Position
10:complement(32527776..32640638)
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AA seq
597 aa
AA seq
DB search
MGSLLSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAAHEPVKTLRSLVNIRKDSLRLVRYKDDLDSPTEENGKQKVLYSL
EFTFDADARVAITIYCQATEEFISGMAVYSTKNPSLQSETVHYKRGVSQQFSLPSFKIDF
SDWKDDELNFDLDRGVFPVVIQAVVDEGDVVVEVTGHAHVLLAAFEKHVDGSFSVKPLKQ
KQIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC
NSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQTMDHDEHSSSDN
IPPGYEPISLLEALNGLRSISPSIPSAPLYEEISYTGVVDGLPPAGRPLAGIDRAMESGP
QKSKRSKSPDSALRSPSSPIHEEDEEKLSEDSDSQPALSGAELVLRENSSPGSMVAEEIE
EISSLQQGSRLPSMEDILPESSCSEHRSLTQLESDPPVDVYLPGSSDSETLPSHGANSPT
QPLLFDQPRFRPEDARSLSFRPSLRGSQLHPKPHAQALLSPRELRAACALQAPQLTL
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgggctccctgctgagccggcgcatcgcgggcgtggaggacatcgacatccaggccaac
tcggcctatcgctacccgcccaagtccggaaactactttgcaagtcactttttcatggga
ggtgagaagtttgataccccacatcccgagggttacctctttggggagaacatggattta
aacttcctggggaacagacccgttcagtttccctatgtcacaccagccgcacatgagcct
gtgaagacgctgagaagtttggtgaatatccgcaaagattctctacgtcttgtgaggtat
aaagatgacctagacagtcctactgaggagaacgggaagcagaaagtcctgtacagccta
gaattcacctttgatgctgatgcccgtgttgccatcacaatctactgccaagctacagag
gaattcatcagtggcatggcagtatacagcacaaagaatccttctctgcagtcagagacg
gttcattacaagagaggggtgagccagcaattctccctgccttccttcaagattgatttc
tcagactggaaggacgatgagttgaactttgatttggatcgtggcgtgttccctgtggtg
atccaagccgtagtggatgaaggggatgtggtggttgaagttactggccatgctcatgtc
ctcctggctgcatttgaaaagcacgtggatggcagcttctctgtgaagcctttaaaacag
aagcagattgtggatcgggtgagttacctgcttcaggagatctatggcatcgagaataaa
aacaaccaggagacaaagccttccgacgatgagaacagtgacaacagcaacgagtgtgtg
gtgtgcctgtccgacctgcgagacaccctcatcctgccctgcaggcacctgtgcttgtgc
aattcctgtgcagacaccctgcgctaccaggccaacaactgccccatctgcaggctgccc
ttccgcgccctgctgcagatccgagccgtgaggaagaagcctggggctttgtcgcccgtt
tcgttcagccccgtcctggcccagaccatggaccatgatgagcactctagctccgacaac
atccctccaggatatgagcccatttcgctgctggaagcattgaatggcctccgctccatc
tccccatccatcccttccgctcctctgtacgaggaaatcagctacaccggcgtggtggat
gggctgccccctgccggccgcccactagccgggattgacagagccatggagagcggccct
caaaagagcaagcggagcaaatctccagacagtgcattacgatctccttcgtctccaatc
catgaagaggacgaggagaagctctctgaggactcggactcccagccagcgctgagcggg
gccgagctggtgctgagggagaacagctctcctggaagcatggtggctgaagaaattgag
gagatctcgtccctgcagcaaggtagccgcctgccctccatggaagacatcctgccggag
agcagctgcagcgagcacaggagccttacgcagttggagagcgaccccccagtcgatgtg
tacctgccagggtcgtccgactccgagacccttccaagccatggcgccaacagtcccact
cagcccctcctcttcgaccagccccggttccgcccggaggacgcgcgcagcctttccttc
cgcccaagcctgcgggggtctcaactacatcccaagccacacgcacaagctctcctctcc
ccgagggagctgagagccgcctgcgccctgcaggccccccaactgactctctga
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integrated database retrieval system
