Trachemys scripta elegans (red-eared slider): 117884468
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Entry
117884468 CDS
T07347
Symbol
JMJD8
Name
(RefSeq) jmjC domain-containing protein 8 isoform X1
KO
K25792
jumonji domain-containing protein 8
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tst03400
]
117884468 (JMJD8)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
117884468 (JMJD8)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cupin_8
JmjC_2
JmjC
Cupin_1
Cupin_2
DUF7511
Motif
Other DBs
NCBI-GeneID:
117884468
NCBI-ProteinID:
XP_034640779
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Position
10:complement(30717625..30727312)
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AA seq
273 aa
AA seq
DB search
MAEGCWRQMGSWWQFLLLYIPLSLSGDLDYLEGNGGWLTNKYLALMEEDHCTVERRDASL
TYSQFIDQYAFSRPVVIQGITDNSEFQALCTRNKLLAEFGDRLVRLSTANTYSYHKVDVP
FQEYVEHLLEPQDLASLGSETLYFFGDNNFTEWGSLFQKYMPPPFRIPGTSGAYSFGIAG
SGSGVPFHWHGPGYSEVIFGRKRWFLYPPEKTPEFHPNKTTLAWLLDTYPFLPPEDRPVE
CTIHPGEVLYFPDRWWHATLNLDTSVFISTFLG
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggctgctggaggcagatgggatcgtggtggcaattccttctcctctacatc
ccattgtcgctgtctggagacttagattacctggaaggaaatgggggctggctgacgaac
aagtacttggctctgatggaagaagaccactgcactgtggagaggagagacgcttccctg
acctactcccagttcatagaccaatatgccttttccaggcctgttgttatccaggggatc
acggataactcggaattccaggcgctctgcacgaggaacaagctgctggcagagttcggg
gaccgcctggtgcgtctcagcactgccaacacctactcctaccataaagtggacgttcca
ttccaggagtacgtggagcacctgctggagcctcaggacctggcctccctaggcagtgag
acactctatttctttggagacaataacttcactgagtggggctccctcttccagaaatac
atgccgcctccgttccggattccaggcaccagcggggcctacagctttgggatcgccggc
tccggttctggggttccctttcactggcacggcccgggttattcggaggtgatcttcggc
cggaagcgctggtttctctatccccctgagaaaacccccgagttccaccccaacaagaca
actctagcctggctgctggacacatacccatttctgccgccagaggaccgccctgtggag
tgcaccattcaccctggcgaggtgctgtatttccctgatcgctggtggcatgccaccctc
aacttggacacgagtgtcttcatctccaccttcctggggtag
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