Trachemys scripta elegans (red-eared slider): 117884476
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Entry
117884476 CDS
T07347
Symbol
TMC3
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
117884476 (TMC3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tst02000
]
117884476 (TMC3)
03037 Cilium and associated proteins [BR:
tst03037
]
117884476 (TMC3)
Transporters [BR:
tst02000
]
Other transporters
Pores ion channels [TC:
1
]
117884476 (TMC3)
Cilium and associated proteins [BR:
tst03037
]
Other cilia and associated proteins
Stereociliary proteins
117884476 (TMC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF2254
Motif
Other DBs
NCBI-GeneID:
117884476
NCBI-ProteinID:
XP_034640789
LinkDB
All DBs
Position
10:69109461..69171614
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AA seq
731 aa
AA seq
DB search
MPSAAAGSNTASGIARMTTVSGSAAVKTTKSCKRHKSVRQHASMYAYKEPPHSNSGDDNG
DLNADSNDPEQIFQNIQFQKEIMANIRCRPWPMRQKLRALRQAKEIVLKYEGRLTRTRGY
QAAGAELWKKFVRLAYNFMVIFIPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTIM
TGAFVVLPELLAGAPFGSTISKTIPKEQFASAQDLDTIWSLGGYLQYSVLFYGYYGRDRK
IGKAGYRLPLAYFLVGMAVFAYSFIILLKNGQEKIYDIVSETIKADFPVWFNTVINYISS
PVVVLPALLLLFMLIYYLQSIARSLKFTNRQLRMQIQTERTEDKKKVVHIAVASIQNLEG
NDKRPEQENDLPHQESSARSSTPRKNGSVLNFESPVTKGSRIQTISQSVPQADVARPANI
TPTTLTPTTSVPSIQKRRTEQVANRYSSVVHGSASELCKTKPYTPVTFKKRVEDVHSEPL
FRKGIQQVNPDTLGAGAPAFVGRKVPTTRYFIVNEHESRKKFLRSTSRLPRHFRMEESGD
IVELYPRNVRRYVVRTPHRTYSPHFSEEEEEEEELRRDLINRSYRPRSLSDLRPGPRFYI
GERVDSQILTGKDLAKVHYRSWDDGFELERDRPPHSHKKSHMKHVDLDRPYPEHHVKPKS
KHKLEQSLTESDSISIGSSSDQQTSSNDQYIQVIHNKEKYLKSGAKFTRKKPKASVDLKM
SESNELICSNV
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgccatctgctgcagctgggtctaacacagcatcaggtattgccagaatgacaacagta
agtgggtctgctgcagtgaaaactacgaagtcctgcaaaaggcacaaaagtgtgaggcag
catgccagcatgtatgcatacaaggagccaccccacagtaactcaggtgatgataatggt
gatttaaatgcggacagcaatgacccagagcagatcttccagaatatacaatttcaaaaa
gagatcatggcaaacatccgttgcagaccatggcccatgaggcagaagctgagggcactc
agacaagctaaggagattgtgttgaaatatgaaggcaggctcactagaacaagaggttac
caagcagctggtgcagagctctggaagaagtttgttcggcttgcatataactttatggta
atcttcattccttgggaaatgagaataaagaaaatagaaagtcattttggatccggagtt
gcctcttatttcatctttttgagatggctatttggaatcaatattgtgcttaccataatg
acaggagcatttgtggtcttaccagagctcctggcaggagcaccatttggaagcactatc
agcaagacgatcccaaaggagcagtttgcatcagcacaggacctggacaccatctggtca
ctggggggttatctccagtactctgttttattctatggctactatggccgagatcggaag
attgggaaagctgggtatcggctgcccctggcttacttccttgttggaatggcagtattt
gcttatagcttcatcatcctcttaaaaaatggacaagagaaaatatatgatattgtgtct
gaaacaattaaagcagattttcctgtatggttcaacacagtgattaattatatcagcagc
cctgtagttgtcctccctgcattattacttctattcatgctaatttattacctgcagagt
attgcaaggtcattaaaattcaccaacaggcaactgagaatgcagatccaaactgaaaga
accgaagacaagaaaaaggtggttcacatagcagtagccagtatccagaatctagaggga
aatgacaaaagaccagagcaggagaatgacctcccccatcaggagtcctcagctcggtca
tcaacaccccgtaagaatggcagcgtcttgaattttgaatctccagtgaccaaaggcagc
agaatacaaacaatttcacaatctgtaccccaagctgatgttgctaggccagcaaatata
actccaacaactttaacaccaactacctctgttcctagcatacagaagcgtagaactgag
caggttgcaaacaggtattcaagtgttgtacatggaagtgcaagtgagctctgcaaaaca
aagccctacactcctgtgactttcaaaaagcgtgttgaagatgttcattctgagcctctc
tttaggaaaggtatccaacaagtaaatccagacactcttggggcgggagctccagctttt
gtgggacgcaaagtacccaccacaaggtattttattgttaacgaacatgaatcccgcaaa
aagtttctccgttccacttcccggctcccaaggcatttcagaatggaggagtcaggagac
atagttgaattatatccaaggaatgtcagaagatatgtggttcgaacaccacacaggaca
tactcccctcacttcagtgaagaggaagaagaggaggaggaattaaggagagacttgata
aacagatcctaccgtccacgctcactctcagatcttcgcccaggtccccgattttacatt
ggtgaacgtgtggacagtcaaatccttactggcaaggatctagccaaagtgcactacaga
tcctgggatgatggctttgagctagaacgagataggcccccacattcccacaaaaagtca
cacatgaaacatgtggatcttgatcggccctatccagagcatcatgtgaaacctaaatcc
aagcataagctcgaacaatctctaacagagtcggattccatttccattggatccagcagc
gatcagcaaaccagcagcaatgatcaatacatccaagtcattcataataaggagaaatat
ctgaaatctggggcaaagtttaccagaaagaaaccaaaggctagcgttgacctaaagatg
tctgaatctaatgaactgatatgttcaaatgtctag
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integrated database retrieval system
