KEGG   Trachemys scripta elegans (red-eared slider): 117884489
Entry
117884489         CDS       T07347                                 
Symbol
ELL3
Name
(RefSeq) RNA polymerase II elongation factor ELL3
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
tst  Trachemys scripta elegans (red-eared slider)
Pathway
tst03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tst00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117884489 (ELL3)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tst01009]
    117884489 (ELL3)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tst03021]
    117884489 (ELL3)
Protein phosphatases and associated proteins [BR:tst01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117884489 (ELL3)
Transcription machinery [BR:tst03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     117884489 (ELL3)
    Little elongation complex (LEC)
     117884489 (ELL3)
SSDB
Motif
Pfam: ELL Occludin_ELL UBR1-like_wing
Other DBs
NCBI-GeneID: 117884489
NCBI-ProteinID: XP_034640802
LinkDB
Position
10:85105580..85115499
AA seq 486 aa
MWGGGSAQPVIAFQGSQGYIKIPCALGSLAEGARLFTFYLSRYSKDKPQASFDCIRQYVS
RLGQSQLDCVGSIQEKITVCATDDSYQLTRARVSQAEKEAWSRAAIEIKPAAPGHGKCVA
IPKKLGMSTPLKKCPTGSPVPGGRKCSPMGTDRRVLVKCLVQLLALRPHCKHELLERLNR
VQISLKDRAQLLPMLQEVGQLNPRESSYSLKEELFGQVQEDWLGYTAEEQQQVRQLLRRK
QAHGAVDRPFLVPLECPSCQGASRRPLGVKRLALLDASDPQGLKKPCAQEHPSSSLGSHR
SLQEPGLEHRRAQSQRQPCQLPRPSAELQSSEEEPSDGEGGDDWEEGALRLEQHLSALQD
SSSQASPPFSFAELPDYCRKYRAICSVEQHHAYMEAFSADYAEYRRLHTRIGHVSRTFIQ
LGAKIKTLPHGTQEHKAVEDRILQEYRRFKQTYPSYRKEKDRCEYLHQKLSHIKGLILEF
EKTGAA
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgtggggtgggggctcagcccagcctgtcatcgccttccaagggagccaggggtacatc
aagatcccctgtgccctgggcagccttgcggaaggagctcgcctcttcaccttctacctg
tcccgctacagcaaggacaagccgcaggccagcttcgactgcatccggcagtacgtctcc
aggctgggccagagccagctggactgtgtgggcagcatccaggagaaaatcaccgtctgt
gccaccgatgactcgtaccagctgacgcgggcgcgtgtgtcccaggcggagaaggaggcg
tggagcagagctgctatcgagatcaagccagcagccccaggccatggcaaatgtgtcgcc
atcccgaagaagctgggcatgagcaccccactgaagaagtgccccactgggagccctgtt
cccgggggccggaaatgtagccccatggggacagatcgcagggttcttgtgaaatgccta
gtgcagcttctggccctgcggccccactgcaaacacgagctcctggagcggctgaacagg
gtgcagatcagcctgaaggacagggcccagctgctgcccatgctgcaggaggtggggcag
ctgaacccccgggagagcagctacagtctgaaggaggagctctttgggcaggtgcaggag
gactggctgggctacacggccgaggagcagcagcaagtcaggcagctcctgcgcaggaaa
caggcccacggagctgtggacaggcccttcttagtgcctctggagtgcccgtcttgccaa
ggtgccagcagaaggcccttgggcgtgaagcggctggcactgctggatgcctcggaccca
caagggctgaagaaaccctgtgcccaagagcacccctcgagctctctggggtcccaccgc
agcctgcaggagcctggcctggagcatcggagagcccagagccagcggcagccatgccag
cttcccaggcccagcgcggagctgcagagctcagaggaggagccgagtgatggggaggga
ggtgatgactgggaagagggagctctgcgcctggagcagcacctttctgccctgcaagac
agcagctcccaggcaagccccccgttctcctttgctgagctcccagattactgccggaaa
tacagagccatctgttccgtggagcagcatcacgcctacatggaggcgttcagtgcggat
tacgcagagtaccggcgcctccacaccaggattggacacgtgagcaggacattcatccag
ctgggagccaaaatcaaaacgctgccgcacgggacgcaggagcacaaggcagtggaagac
agaatcttacaggaataccggaggttcaagcagacttaccccagctacaggaaggagaag
gaccgctgcgagtatcttcaccaaaagctgtcccacatcaagggcctcatcctcgagttt
gagaagacaggggctgcctag

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