Trachemys scripta elegans (red-eared slider): 117884693
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Entry
117884693 CDS
T07347
Symbol
SNX4
Name
(RefSeq) sorting nexin-4 isoform X1
KO
K17919
sorting nexin-4
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117884693 (SNX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117884693 (SNX4)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tst04990
]
117884693 (SNX4)
Membrane trafficking [BR:
tst04131
]
SNARE
SNARE associated proteins
Others
117884693 (SNX4)
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
117884693 (SNX4)
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
117884693 (SNX4)
Domain-containing proteins not elsewhere classified [BR:
tst04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117884693 (SNX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
Motif
Other DBs
NCBI-GeneID:
117884693
NCBI-ProteinID:
XP_034641193
LinkDB
All DBs
Position
11:complement(11530939..11587011)
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AA seq
441 aa
AA seq
DB search
MERPEAEPLGASDSCQAGEAEPGTGPAEEEPGGGAAGTMMEDCLSKKIEITVSEAEKRTG
RNAMNMQETYTAYLIETRAVESQTEGQCSPPDSLWRRYSEFELLRNYLLVNYPHIVVPPL
PEKRAEFVWHKLSADNMDPDFVERRRIGLENFLIRVASHPIICQDKIFYSFLTQEGGWKE
MVNETGFQLKADSRLKALNATFRVKNPDKRFTELKHYSDELQSVISHLLRVRARVADRLY
GVYKVHGNYGRVFSEWSAIEKEMGDGLQSAGHHMDVYAASIDDILEEEEHYADQLKEYLF
YAEALRAVCRKHELMQYDLEMAAQDLASKKQQCEELATGTLRTFSLKGMTSKLFGQETPE
QREGKIKVLEEQIHEGEEQLKSKNVEGREFVKSAWTDIERFKEQKNQDLKEALINYAVMQ
ISMCKKGIQVWTNAKECFSKM
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggagaggccggaggccgagccgctcggcgctagcgacagctgccaggcgggcgaggct
gagccgggcaccgggcccgcggaggaggaacccggcggaggagcagcgggcacgatgatg
gaagattgtttatcaaagaaaatagagatcactgtctcagaagcagaaaaacggactgga
agaaatgccatgaacatgcaagaaacctacactgcttacctcattgagacaagagctgtt
gagtctcagactgaaggacagtgctctccaccagactccctttggaggcgatacagtgaa
tttgagttgctgaggaattatttgttagttaactatccgcatattgttgttccacctttg
ccagaaaaaagggctgagtttgtttggcataagttatcagcggataacatggatccagac
tttgtggaaagacgaaggattggtttggaaaactttctaatacgtgtggcttcgcatccc
atcatttgtcaggacaaaattttttattcctttttaacacaggaaggtggatggaaagaa
atggtgaacgagaccggatttcagttaaaggcagactccaggttaaaagctcttaatgca
acattcagagtgaagaacccagacaagagatttactgagctaaaacactacagcgatgaa
ctgcagtctgtcatatcacaccttctgcgagtcagagctagagtggcagaccgtctctat
ggtgtatacaaagtgcatgggaattatgggagagtgttcagtgaatggagtgcaatagaa
aaggagatgggggatgggctgcagagtgctggccatcacatggatgtgtatgcagcttct
attgacgacatattggaagaggaagaacattatgcagatcagctaaaagaatatcttttc
tacgcagaagctctgagggccgtttgcaggaaacatgaactaatgcagtacgacttggaa
atggctgctcaggacttggcatctaagaaacaacagtgtgaagaactggcaacaggaact
ctgagaacgttttctctaaagggaatgacgagcaaactgtttggtcaggaaactcctgag
caaagagaaggcaagataaaggttctagaagaacagatccatgaaggggaagaacaactg
aaatctaaaaatgtggagggcagagagttcgtgaaaagtgcttggacagatattgaacgc
ttcaaagagcaaaagaatcaagacttgaaagaggccctcataaattatgctgtgatgcag
attagcatgtgcaaaaagggaattcaagtttggacaaacgcaaaagagtgcttcagcaag
atgtga
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