Trachemys scripta elegans (red-eared slider): 117884697
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Entry
117884697 CDS
T07347
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like
KO
K23619
collagen type XXVIII alpha
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tst01002
]
117884697
Peptidases and inhibitors [BR:
tst01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
117884697
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Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
Motif
Other DBs
NCBI-GeneID:
117884697
NCBI-ProteinID:
XP_034641201
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Position
11:36277743..36337229
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AA seq
1186 aa
AA seq
DB search
MFYRFWWLLWILGQHVFWAQNLNEDKRNGVRQQKSKHFLSNAVEKYPSPSDQDEDCVLEI
AFLLDSSESAKNYNHEQQKKFVLETVNSMKEVQVNSGRTLSWRMALLQYSSTVIMEQTFR
DWKGPEAFKSRIAPITYIGHGTYTTYAITNLTQLYMTEGTYGSVKAAVLLTNGVDHPRNP
DIFAATADAKHQGIVFFTVGMTRVAEEVANAAKLRLLASVPASRFVFNLQEKGVVEKIVK
EMKDLAEEGCPQAPTCNCEKGERGLPGPAGKKGRPGDNGGPGQKGVKGEAGLNGIPGKDG
TEGKSGYKGEKGERGDCGTPGIKGDRGPEGPVGHTGLRGLQGSQGLPGDQGPEGVQGSKG
ERGLPGPPGLTGETGIGLPGPKGDIGLTGRPGPVGPPGAGEPGLPGPQGPQGIQGERGSP
GEGLPGPKGERGFDGPKGPRGQPGTGIKGEKGEIGPPGLPGPIGLSGIGIQGEKGVEGPK
GPPGPRGPPGQGLPGSKGEQGLPGETGAPGERGPGEPGSKGEPGSSGLAGLPGLPGEDGA
PGQKGEPGVPGLRGPEGAPGIGIQGEKGDQGQRGVRGLSGPTGVPGPAGAKGEPGGPGRL
GMPGLPGRAIPGPKGDIGLPGPAGPVGEPGVGIPGAKGDRGHPGPLGPFGPKGDGYPGPP
GLPGLPGAPGEQGPEGFGLPGPKGDPGVRGPVGLPGPPGEGLPGPKGNVGRQGSPGPLGP
PGEGIQGSKGEQGIQGMPGPRGPPGEGLLGPKGDRGAAGERGRKGEKGNMGDPGLSGEPG
STGPKGEQGLTREDIIKLIKEICGCGIKCKEIPMELVFVIDSSESVGPENFEIIKDFVTA
LVDRVTVGRNATRIGLVLYSLEVRLEFGLNRYTTQQDVKQAIRKMLYMGEGTYTATAIRK
TTQEGFFGARTGVRKVAIVLTDGQADKREAIKLDIAVREAHATNIEMYAIGIVNTSDPTQ
VEFLRELNLIASDPDREHMYLIDDFNTLPALESKLVNQFCEDEHGALIYNRIGNGASISG
PSIHSLSSSSSHYLLHSINNVNGQSVSSDSHGTSVKERKLSQPLIPTKESSVAVYEDGQP
SLPSVNTRVVVSSLPSSPPDKMLSPSLSSASSVLLTPRPENILDPRCKLRLDQGSCRVYI
IKWYYDKQANACAQFWYGGCDGNANRFDVEDECKKACVFHSGGKTV
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgttctacagattctggtggcttttgtggatactaggacagcatgtgttttgggcacaa
aatctcaatgaagacaaacgaaatggagtaagacaacaaaaatctaagcactttctgtca
aatgctgtagaaaaatatcccagtccaagtgatcaagatgaagattgcgttcttgaaata
gcttttctactggacagttcagaaagtgctaagaactataatcacgaacaacagaaaaaa
tttgtattagaaacagtgaacagtatgaaagaagtgcaagtcaattctggacgtactctc
agctggaggatggccttacttcagtacagtagcactgttatcatggagcaaactttccga
gactggaaaggtcctgaagctttcaaatctcgcattgctcccataacctatataggccat
ggtacctacacaacatatgccataaccaatctcacacaactgtacatgactgaagggact
tatggcagtgtgaaagcagctgtgctcttgacaaatggagtggatcatccaagaaatcca
gatatttttgcagctactgctgatgctaaacatcaaggaattgtgttcttcacagtagga
atgaccagagtggctgaggaggtggccaatgctgccaagcttcgacttctggccagtgtc
ccagcatcaaggtttgttttcaacctccaggagaaaggagttgtggagaaaattgtgaaa
gaaatgaaagatctggctgaagaagggtgtccccaagctcctacatgtaactgtgagaaa
ggggaaagaggccttcctggccctgccgggaaaaagggtcgtccaggtgataatgggggt
cctggccagaaaggagtaaagggggaggcaggtctcaatggaattccaggaaaagatgga
acagagggaaaatctggctacaaaggagaaaagggggaaagaggtgactgtggcactcca
gggataaaaggtgacagaggtccagaaggtccagttggtcacacaggattaagaggtcta
cagggttcccaagggctacccggagaccaagggcctgaaggtgtgcaaggatcaaagggt
gaaagaggcctccctgggccccctggattgactggagaaactggaataggattgcctggc
ccaaagggtgacattggcttgacaggaagaccaggccctgttggcccacctggagctggt
gagccaggactaccggggcctcaaggacctcaagggattcaaggagaaagagggtcacca
ggtgaagggcttccaggaccaaagggagagcgtggttttgatggtccaaaaggacctcgt
ggccagccgggcactggcataaaaggtgaaaagggtgaaattggcccacctggtttacct
gggcctattgggttatctggcattgggattcaaggagaaaagggggtagaaggcccaaaa
ggaccgcctggtccaagagggccacctggacaagggctacctggatcaaagggagaacaa
ggcttgccaggagaaactggagctccgggagaaagaggtcctggggaacctggttcaaag
ggtgagccaggttcttcaggactggcaggtctgcctggtcttccaggggaagatggagcc
ccaggacaaaagggggagccaggagtacctggccttcgaggtcccgagggtgccccaggg
attggaatacagggtgagaagggtgatcaaggtcagagaggtgtacgtggattatcggga
ccaacaggagtacctggacctgccggtgctaaaggcgaacctggtgggccaggacgtctt
ggaatgccaggtcttcctggtcgagctattccaggaccaaagggtgacattgggttacct
ggtcctgctggcccagttggagaaccaggagttgggattcctggcgcaaagggtgaccgt
ggtcatccaggaccacttggaccatttgggccaaagggagatggttatccaggcccacct
ggacttcccggtcttccaggagctcctggtgaacaaggccccgaaggatttggattacca
ggacctaagggtgatccaggtgttagaggaccagttggtctcccaggtccaccaggagaa
ggccttccaggaccaaaaggaaatgtaggacggcaagggtccccaggccccctgggacct
ccaggtgaaggtattcagggatctaagggtgagcaaggaattcaaggaatgccaggacct
cgggggcctcctggggaaggactacttggaccaaagggtgatcgcggtgctgcaggtgaa
aggggaagaaaaggagaaaaaggcaacatgggtgatcctggtttgtccggagaacctggc
agtactggacccaagggagagcaaggcctaacaagagaagatataattaaattaattaaa
gagatatgtggctgtggtattaaatgtaaggaaatacctatggagcttgtgtttgtgatt
gacagctctgaaagtgtgggaccagaaaattttgagataattaaagactttgtcactgct
ttagtagatagagtaactgtaggcagaaatgctaccagaattggtcttgtactctacagt
ttagaggttcggctagaatttggacttaacaggtacacaacccaacaagatgtgaaacaa
gcaattagaaaaatgctgtatatgggggaaggtacatatacagcaactgctatccgcaaa
acaacacaggaaggattttttggtgctcgaactggtgtgcgaaaagtagctatagtatta
acagatggacaggcagataagagagaggctattaaactggatatcgctgtccgagaggcc
cacgcaaccaacattgaaatgtatgcaataggaattgtaaatacttcagatccaacacaa
gttgaattcttgcgtgaactaaatctgattgcatcagatcctgacagagaacatatgtat
ctcattgatgattttaatactcttccagctttggagtccaaattagtaaaccagttttgt
gaagatgagcatggtgccttaatatataatcgtattggaaatggtgcaagcataagtgga
ccatctatccattcactgtcttccagttcttcacattacttacttcacagcatcaacaat
gttaatggacaatcagtttcatcagacagtcatggaacatctgtgaaagaaagaaagctt
tctcaaccattaattccgaccaaagaatcatctgtggcagtttatgaagacgggcagcca
tccttgccctcagtgaacaccagagtagtggtatcatcactgccatcatcaccgccagac
aaaatgctgtcaccatctctttcatcagcttcctctgtgttgcttacacccagaccagaa
aatatcctggatccacgatgtaaattgagattagatcaagggtcatgtcgtgtgtatata
ataaaatggtactatgataaacaagctaatgcctgtgctcagttttggtatggcggttgt
gatggaaatgcaaatcgctttgacgttgaagatgaatgtaaaaaggcctgtgtatttcat
tctggaggtaagactgtataa
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