Trachemys scripta elegans (red-eared slider): 117884757
Help
Entry
117884757 CDS
T07347
Name
(RefSeq) C-type lectin domain family 4 member E-like isoform X1
KO
K10059
C-type lectin domain family 4 member E
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
117884757
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tst04054
]
117884757
04091 Lectins [BR:
tst04091
]
117884757
Pattern recognition receptors [BR:
tst04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
117884757
Lectins [BR:
tst04091
]
C-Type lectins
Asialoglycoprotein and DC receptors
117884757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
DUF2798
Motif
Other DBs
NCBI-GeneID:
117884757
NCBI-ProteinID:
XP_034641397
LinkDB
All DBs
Position
1:complement(132017860..132032524)
Genome browser
AA seq
240 aa
AA seq
DB search
MASEVTYAEVKFKNAAPPPAETKVPPEKSTAQSALQKPTWRFLWLVSALLLLLCVSLLIA
LIVTLLKGTGGCEEHKALPQSSAEWHCVLGRAEEKGQVWTCCPMGWKHFQSSCYYFSIDT
MNWSDSETNCTGMSSHLVVINTGTEQDFILNWIKRTVTSFQNKNYYIGLTDQAQEGQWHW
VDQTPYNETAAFWRQGEPSNSKMENCAVMHVKTNANRKNWNDIPCSTTVNRICETDATRF
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggaggttacttacgctgaggtaaagttcaagaatgcagcaccaccacctgca
gagaccaaagtacctccagagaagagcacagcgcagagtgcactccagaagcccacgtgg
cgattcctgtggttggtctcagcactgttgctgttgctgtgtgtctctctcctcattgcc
ctcattgtcactctactcaagggaactggaggctgtgaagagcacaaggccctgccccag
agttctgcagagtggcattgtgtcctggggagagctgaggagaaagggcaagtctggaca
tgctgccccatgggctggaagcactttcagtccagctgctactacttctctatagacacc
atgaactggagtgacagtgagacaaactgcacaggaatgagttcccacttggtggtgatc
aacacaggaactgagcaggatttcattttaaattggataaaaagaactgttacatccttc
caaaataagaattactatattggtctgacagatcaggcacaggaaggccagtggcactgg
gtggatcagactccatataatgagactgcagcattctggagacaaggtgaacccagtaat
agcaaaatggagaactgtgctgtcatgcatgtaaagacaaatgcaaataggaagaattgg
aatgacattccgtgttccactacagtaaatagaatttgtgaaactgatgcaacaaggttt
tga
DBGET
integrated database retrieval system
