Trachemys scripta elegans (red-eared slider): 117884782
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Entry
117884782 CDS
T07347
Symbol
ITGB5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04145
Phagosome
tst04148
Efferocytosis
tst04510
Focal adhesion
tst04512
ECM-receptor interaction
tst04810
Regulation of actin cytoskeleton
tst04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117884782 (ITGB5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117884782 (ITGB5)
04148 Efferocytosis
117884782 (ITGB5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
117884782 (ITGB5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117884782 (ITGB5)
04810 Regulation of actin cytoskeleton
117884782 (ITGB5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117884782 (ITGB5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tst04515
]
117884782 (ITGB5)
Membrane trafficking [BR:
tst04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
117884782 (ITGB5)
Cell adhesion molecules [BR:
tst04515
]
Integrins
Integrin beta subunits
117884782 (ITGB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
EGF_TEN
vWA_SIBA-E
RNA_pol_A_CTD
Motif
Other DBs
NCBI-GeneID:
117884782
NCBI-ProteinID:
XP_034641462
LinkDB
All DBs
Position
11:complement(11036175..11152607)
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AA seq
802 aa
AA seq
DB search
MPRRRGLSSPSAACLFILSSLLHHLRGLNICTSGSATSCEECLLIHPKCAWCSKEEFGST
KFITSRCDFVENLITNGCAGELETPKSSINIVENLPLSSKGSSLTLSDVTQIMPQKISLN
LRPGDKTSFRVQVRQVEDYPVDLYYLMDLSLSMKDDLDNIRNLGTKLAEEMRKLTSNFRL
GFGSFVDKNISPFSYTAPRYQNNPCIGYKLFPHCVPSFGFRHLLSLTDKVDRFNEEVQKQ
KVSRNRDAPEGGFDAILQASVCKEKIGWRKEASHLLVFTTDDVPHIALDGKLGGLVQPHD
GQCHLNEANEYSASNQLDYPSLALLGEKLAENNIHLIFAVTKAHYILYKNFTALIPGTTV
EILHQDSNNIIQLIVKAYNSIRSKVELTVWDNPEDVSLTFTATCQDGLLYPGLRKCADLQ
IGDTVSFEVSVEARSCPAENTSHTFTIKPAGFRDTLEVEVAYNCTCGCTKQMERNSSKCS
GNGTYTCGLCECDSGYLGSKCECEEGESGNMYQNMCREAEGKPVCSGRGECSCNQCICYK
SEFGRIYGLFCECNDFSCARYKGVLCSGHGECHCGECKCHAGYIGDNCNCSTETNRCISN
DSQMCSGRGNCVCGKCQCTEPGAFGETCEKCPTCPGACSTKRDCIECMLHNSGGLADNQT
CPKHCKDEIITRVDVLKTDDQHSVLCVYPMNDCVMKFTYSELPSGKSNLTVLKKPECGSA
PNALTILLAVVGSILLIGIVLLVVWKLLVTIHDRREFARFQSERSRARYEMASNPLYRKP
ISTHSLDFTFNKLSKSYNGTID
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgccccggagacgggggctctcttcccccagcgccgcctgcctcttcatcctctcctcc
ctgctccaccacctccggggtctcaatatttgcacaagtggaagtgctacttcctgtgaa
gagtgcctgctcatccatccaaaatgcgcttggtgctccaaagaggaatttggcagcaca
aaattcatcacatcaaggtgcgacttcgtagaaaacctgattacgaatggctgtgcaggg
gaacttgagactcccaaaagcagcattaacatagtggagaatcttcctctaagtagcaag
ggctctagcttgaccctttcggatgttacacaaataatgcctcagaagatctcgttgaat
ctgcggcctggtgacaagacttccttccgagtgcaggttcgtcaggtagaagactatcct
gtggatttgtattacttgatggatctctcgctatccatgaaggatgacctggataacatt
cggaatctgggaaccaagctggctgaggagatgaggaagctcaccagcaatttccggctg
gggtttgggtcatttgtggacaaaaatatttctcctttctcctacacagctccacgatat
caaaacaatccctgcattggttacaagttatttccacactgtgtcccatcctttggattc
cgccatctcttgtccctcacggataaagtggaccgtttcaatgaagaagttcagaaacag
aaggtttcccggaacagagatgctccagaaggtggctttgatgcaatcctgcaggcttct
gtgtgcaaggaaaagattggctggcggaaagaggcctctcacttgctggtcttcacgacg
gatgatgtgccacacatagcactggatgggaagttaggtgggctggtccagccacatgat
ggccagtgtcacctgaatgaggcaaatgaatacagtgcgtccaaccagctggattatcct
tccctggcacttcttggggagaaactggctgaaaacaacattcacctcatttttgctgtg
acaaaagctcattatatcctttacaagaattttacagcactaattcccggaacgacagtg
gagattttacatcaagactccaacaacattatccagctgatagtcaaggcatacaatagt
attcggtctaaagtagaactgaccgtttgggacaatcctgaggatgtcagcctgaccttc
acagctacgtgccaagacggtttgttgtatcctggactcaggaagtgtgcagatctccaa
atcggagacacagtttcctttgaggtgtctgtcgaagctcggagctgccctgccgagaac
acctcgcacactttcaccataaagccagctgggttccgggacactctggaggtggaggtt
gcttacaactgcacttgtggatgtacgaagcaaatggaacggaacagcagcaagtgcagt
gggaatgggacttacacatgtggattatgtgaatgtgactcaggctatttgggatccaag
tgtgaatgtgaagagggagagagcgggaacatgtatcagaacatgtgccgggaggctgaa
ggcaaacctgtctgcagtggcaggggggaatgcagctgcaaccagtgcatctgctacaag
agtgagtttggaaggatctacgggttgttctgtgagtgcaatgacttctcctgtgccaga
tacaagggtgtcctctgttcaggccatggagagtgtcactgtggggagtgcaagtgccat
gctggttacatcggagacaactgcaactgctcgacggagactaaccgttgcatttcgaat
gacagtcagatgtgcagcggcagaggcaactgtgtctgtgggaaatgccaatgcaccgag
cccggagcctttggagagacgtgcgagaaatgtcctacctgcccaggtgcctgcagcact
aaaagggactgcattgagtgcatgttacataactcaggaggactggctgataaccaaacc
tgcccaaaacactgcaaggatgagatcattacacgtgtggatgtcctcaaaacagatgac
cagcactcggtcctgtgtgtctaccccatgaatgactgcgtgatgaagttcacctactcg
gaacttcccagtggaaagtccaatctcaccgtcctcaaaaagccagagtgtggctctgca
cccaacgccctgaccatcttgctggccgtggtgggcagcatcttactgataggaattgta
cttctggttgtctggaagctgcttgtcaccattcacgacagacgggagtttgccagattc
caaagcgaacgctcccgggcgagatatgaaatggcatccaatcctctttaccgaaagcct
atttctacgcatagcttagatttcacattcaacaagctaagtaagtcctataatggcaca
attgattga
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integrated database retrieval system
