Trachemys scripta elegans (red-eared slider): 117884794
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Entry
117884794 CDS
T07347
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tst04040
]
117884794
Ion channels [BR:
tst04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
117884794
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
IQCJ-SCHIP1
Lustrin_cystein
FUT8_N_cat
ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
117884794
NCBI-ProteinID:
XP_034641484
LinkDB
All DBs
Position
11:complement(34453856..34594812)
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AA seq
1989 aa
AA seq
DB search
MAQALLVPPGPDSFFYFTRESLAAIEQRIAEEKANRLKEDHKDDDVNEENGPKPNSDLEA
GKTLPFIYSDIPPGMVSEPLEDLDPYYINKKTFIVLNRGKAIFRFNATPALYILSPFHPL
RKAAIKILVHSLFSILIMCTILTNCVFMTLRNPPDWAKNVEYTFTGIYTFESLIKILARG
FCIGHFTFLRDPWNWLDFTVITFAYLTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCLLWPLNVSSSENRFASFFIN
DTVFDWKAYIEDERHFYSLAGQNDALLCGNSSDAGQCPEGYTCIKAGRNPNYGYTSFDTF
SWAFLSLFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLILAVVAMAYEE
QNQATLEEAKQKEAEFQQMLEQLRKQQEEVQAIAEAAAELRDFGGEDRICGLSESSSEAS
KLSSKSAKERRNRRKKRRQRELSGGEDKLDDEKLPKSDSEGNIRRKGFRFSLEGNRLTYE
KHFTSPHQSLLSIRDSLFSPRRNSRTSLFSFRGRVKDVGSENDFADDEHSTFEDDSRRGS
LFVPLRHERHNSNISQGSASSRRLPVNGKMHSTVDCNGVVSLVGGQTSLLSPTGQLLPEV
IIDKPTTDDNSTTSEIEIKKRRSSSYKISMDLLEDPTIRHRAMSIASILTNTMEELEESR
QKCPPCWYKFANTFLIWDCCAPWLKVKHIVSLIVMDPFVDLAITICIVLNTLFMAMEYYP
MTKHFHNVLSVGNLVFTGIFTAEMVLKLIAMDPYYYFQVGWNIFDGFIVTLSLVELFLSN
VDGLSVLRSFRLLRIFKLAKSWPTLNKLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQL
FGKNYKECVCKISKDCILPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIV
FMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNETNNLQIAVARIQRGIDYVKTKAR
ECAQKTFVRVQNDVDEIKSIGQLNNKEDNYTTNHTVAEMNRNLDNRKDNNGTTGVVGNRD
YVSFIHNPNLTVTVPIAIGESDFEHLNTEEFSSESELEESKEKLNIYSSSEGSTIDITFL
GEEKADIESEEALEPKACFTEGCVRKFKFCQVRLENKKGKIWWNLRKTCYKIVEHNWFET
FIVFMILLSSGALAFEDIYIEKRKAIRTVLEYADKVFTYIFILEMVLKWVAYGFQTYFTN
AWCWLDFLIVDVSLISLTANALGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNALLG
AIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFFFCVNTTSGDTFSREKVMNKTDCEILKND
NKDVLWKNVKVNFDNVGAGYLSLLQIATFKGWMPIMYAAVDSINIDQQPKYEESLYMYLY
FVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKP
IPRPANKFQGLMFDIVTKQAFDISIMILICLNMVTMMIETDEQSDEMKHILYWINLVFIV
LFTGECVLKLVSLRYYYFTIGWNIFDFVVVILSIVGMFLDKVIEEYFVSPTLFRVVRLAR
IGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKREDGID
DMFNFETFGNSMICLFQITTSGGWDLLLSPILNSGEPDCDPNKPHPGSSVKGDCGNPSVG
IFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWEKYDPDATQF
IEYSKLSDFAASLDPPLLVAKPNTLQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESDEL
DALRIQMEDRFMAANPSKVSYEPITTTLKRKQEEVSATVIQRAYRHYLLRQTVKKVSFMY
RKEKHGLPIKEDMTLDKLSENSAAEKTNGTPSTTSPPSYDSVTKPDKDKYEKDHSEKEDK
SKDTRESKK
NT seq
5970 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggcactgctggtaccaccgggacctgacagcttcttctacttcactagagag
tctcttgcagctattgaacaacgtatcgctgaagaaaaggctaatcgtctcaaagaagac
cataaagatgatgatgtcaatgaagaaaatggcccaaagccaaatagtgacttggaagca
ggaaagacactcccatttatttatagcgacatacctccgggaatggtgtccgaacccttg
gaggacctggacccatattacatcaataaaaagacttttatagtattgaatagagggaag
gcaatctttcgattcaatgccacacctgccttgtacattttatctcctttccatcctctt
agaaaagcagctatcaagattttggttcattcattattcagcatacttattatgtgcact
attctgactaactgtgtatttatgacattgcgtaaccctccagattgggcaaagaatgta
gagtacacttttactggaatttatacatttgaatcccttataaaaattcttgcaagaggc
ttctgtataggtcattttacttttcttcgagacccctggaactggcttgattttactgtt
attacatttgcatatctgacagagtttgtggacctcggcaacgtctcagcattgagaaca
ttcagagttctccgagcattgaaaacaatatcagtcattccaggcttgaagactattgta
ggagccctaattcagtctgtgaagaagctctcagatgtaatgatcctgactgtgttttgt
ctgagtgtatttgcactaatagggctgcagttgttcatgggcaacttgaggcataaatgt
ttgctgtggcccttaaatgtatcttcttctgaaaatagatttgcttcattcttcattaat
gacacagtgtttgactggaaggcgtacattgaagacgaacgtcatttttatagtttagcg
ggacaaaacgatgccctgctttgtggtaatagctccgatgcaggtcaatgtccagaagga
tatacatgtataaaagctggtagaaaccccaactatggctacacgagttttgacacgttc
agctgggcattcttgtcactgtttcgactgatgactcaggattactgggaaaacctttat
caactgactctacgtgctgctggcaaaacatacatgatatttttcgttctggtgattttc
ctgggctctttctatctgattaacttgatcctggctgtggttgccatggcctatgaagaa
cagaatcaagcaaccctagaagaagcaaagcagaaggaggcagaatttcagcagatgctt
gaacagctgagaaagcaacaagaagaagttcaggcaatagcagaagcggctgctgagtta
agagattttggtggcgaagataggatttgtgggctctcggagagttcttcagaagcatcg
aagttgagctcaaagagtgctaaagaaaggagaaatagaaggaagaaaagaagacagaga
gagctttctggaggagaggacaagttggatgatgaaaagcttcccaaatctgattcagaa
ggcaatatcagaagaaaaggtttccgtttctctttggaagggaatagactgacatatgaa
aaacatttcacttccccccaccagtctttgctgagcattcgtgactccctgttttcccca
aggcgcaacagcagaacgagtcttttcagctttagaggtcgagtaaaggatgtaggatca
gaaaatgactttgctgatgatgaacatagcacttttgaagatgatagcagaagaggttct
ctttttgtgccactcagacatgaacggcacaatagtaacattagtcagggcagtgcgtca
tcaaggaggcttccagtgaacgggaagatgcatagtactgtggactgcaatggagtggtt
tccttggttggtggacaaacatcactcttgtcgcctactggacagcttctgccagaggtg
ataatagataaaccaactactgatgacaatagcaccacttcagaaatagaaataaagaag
aggaggtcaagttcttataaaatatcaatggatttactggaagatccaactataaggcac
agagcaatgagtatagccagcatactcacaaacacaatggaagaacttgaagaatccagg
caaaaatgcccaccgtgctggtataaatttgccaacactttcttgatctgggactgttgc
gctccttggttaaaagtaaaacatattgttagtttgattgtgatggatccatttgttgat
cttgctattaccatctgcattgttttaaacacactgtttatggccatggaatattatcca
atgactaaacacttccacaatgtgctttcagtaggaaacctggttttcaccgggatcttc
acagcagaaatggttctcaagttaattgccatggatccttattattatttccaagtaggg
tggaatatttttgatgggtttattgttacccttagtttggtggagctttttctttcaaat
gtggatggactatcagttctccgatcattcagattgttgcgaattttcaagttggcaaaa
tcttggcccacactaaacaaactgataaagattattggtaactcagtgggggctttggga
aatttgacgttggtgctggccatcattgtcttcatttttgctgtggttggtatgcagctg
tttggtaaaaactacaaggaatgtgtctgcaagatctccaaagactgtatacttccacgc
tggcacatgaatgacttcttccactctttcttgattgtattccgagtgttgtgtggagaa
tggatagagactatgtgggactgtatggaggttgccggccaagccatgtgccttatcgtt
ttcatgatggtcatggtgattggaaatctagtggtactgaacctgtttttggccttgctg
ctgagctcatttagttcagacaaccttgctgcaacggatgacgataatgaaacgaacaat
ctgcagatcgctgtggcaaggattcagaggggaatagattatgtgaaaacaaaagcacgt
gaatgtgcccaaaaaaccttcgtgagagtacaaaatgatgtagatgaaataaaatctatc
ggtcagctaaacaacaaggaagacaactacactaccaaccatactgtagctgaaatgaat
agaaatctggataatcgcaaagataataatggaaccactggtgttgtaggcaaccgtgat
tatgtatcattcatacacaacccaaaccttactgtgaccgtaccaattgctattggggaa
tcggattttgaacatttaaatacagaagagtttagcagtgagtcagagctggaggaaagc
aaagagaaattaaatatttacagctcatctgaaggtagtacaattgatataactttcctt
ggagaagaaaaagcagatattgaatcagaagaagcactagaaccaaaggcctgttttaca
gaaggctgtgtacgaaaattcaagttctgtcaggtccgcctagaaaataagaaaggaaaa
atctggtggaatcttcgaaaaacctgctataagatagtggaacacaactggtttgaaacc
ttcattgtcttcatgattctcctcagcagtggtgctctggcttttgaagatatatatatt
gaaaagcgtaaggctatcaggaccgtgctagaatatgctgataaggtcttcacttacatc
ttcattctggaaatggtgctaaaatgggtggcctatggttttcaaacctatttcactaat
gcctggtgctggctggatttcctgattgttgatgtttctttgattagcttaacagctaat
gccttgggctactctgaacttggtccaattaaatcacttcgaacgctacgagctttgaga
cctttgagagccttgtcgcgatttgaaggaatgagggtggttgtgaatgcccttttagga
gcaataccatctattatgaacgtacttctggtttgtcttatattctggctaattttcagc
ataatgggagtaaatttgtttgctggcaagttcttcttctgtgttaacaccacaagtggt
gacactttttcaagagaaaaagttatgaataaaactgattgtgagattctaaagaacgac
aataaagatgtcctgtggaaaaatgtgaaagtaaactttgataatgttggagctggctat
ctttctctgcttcaaatagctacttttaaaggatggatgcctatcatgtatgcagctgtt
gattccataaatatagaccagcagcccaagtatgaagaaagcctgtatatgtatctttac
tttgtcatctttatcatctttgggtcattcttcactttgaaccttttcattggtgtcatc
atagataacttcaaccaacaaaaaaagaagtttggaggtcaagacatcttcatgacagaa
gaacagaagaaatattacaatgcaatgaaaaagctgggttcaaagaaaccacaaaaacct
atacctagaccagcgaacaaattccaaggtttgatgtttgatattgtaacaaaacaagca
tttgatatcagcatcatgattcttatctgcctcaacatggtcacaatgatgatagaaact
gatgagcagagtgatgagatgaaacatattttatactggattaacctggtctttattgtc
cttttcactggagaatgtgtcctcaaactagtttcactccgttattactacttcaccata
ggctggaacatttttgattttgtggttgtcattctctccatagtaggtatgtttctagac
aaggtgattgaagagtattttgtgtcccccaccttgttcagagttgtccgactcgccaga
ataggtcgaatcctgcgtctcattaagggagctaaagggatccgcactctgctttttgct
ttgatgatgtctcttcctgctttgtttaacattggtctcctgcttttcctggtcatgttt
atctatgctatatttggaatgtccaactttgcttatgttaagagggaagatggtattgat
gacatgttcaactttgaaacttttggcaacagcatgatctgcctatttcaaattaccacg
tccggtggttgggatctgttgctgtcaccaattcttaacagtggagaaccagactgtgat
cctaataaacctcacccaggaagctcggttaaaggagactgtggtaacccttcagttggg
attttcttttttgtcagttatattatcatctcatttctagttgtagtaaacatgtatatt
gctgttattttggagaacttcagtgttgctacagaagaaagtgccgagcccttgagtgag
gacgactttgagatgttctatgaggtttgggaaaagtatgatccagacgccacccagttc
atagaatacagtaaactgtctgattttgcagcttcactggatcctcctcttcttgtagca
aaaccaaacactcttcagcttattgcaatggatctgcccatggtgagtggtgacagaatt
cactgccttgacatcttgtttgcttttacaaagcgtgttttgggggaaagtgatgagctg
gatgcacttagaatacaaatggaagatcgttttatggcggccaatccttctaaagtctcc
tatgaaccaattacgaccacattaaaacgaaaacaagaggaagtgtccgctactgttatt
cagcgagcttacagacattaccttttaaggcaaacggtgaaaaaagtttcatttatgtat
cgcaaagaaaagcatggtctgcctatcaaagaagatatgactctggataagctaagtgaa
aactcagctgcagaaaaaacaaatgggaccccctccacaacttctccaccttcctacgat
agtgtaacaaagccagacaaagacaaatatgaaaaagaccattcagaaaaagaagacaaa
agtaaggacaccagggaaagtaaaaagtaa
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integrated database retrieval system
