Trachemys scripta elegans (red-eared slider): 117884810
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Entry
117884810 CDS
T07347
Symbol
ITGB6
Name
(RefSeq) integrin beta-6 isoform X1
KO
K06589
integrin beta 6
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04510
Focal adhesion
tst04512
ECM-receptor interaction
tst04518
Integrin signaling
tst04810
Regulation of actin cytoskeleton
tst04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117884810 (ITGB6)
04518 Integrin signaling
117884810 (ITGB6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117884810 (ITGB6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117884810 (ITGB6)
04810 Regulation of actin cytoskeleton
117884810 (ITGB6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tst04147
]
117884810 (ITGB6)
04515 Cell adhesion molecules [BR:
tst04515
]
117884810 (ITGB6)
Exosome [BR:
tst04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
117884810 (ITGB6)
Cell adhesion molecules [BR:
tst04515
]
Integrins
Integrin beta subunits
117884810 (ITGB6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
EGF_TEN
DUF8130
vWA_SIBA-E
WD40_Apc4_C_fungal
Motif
Other DBs
NCBI-GeneID:
117884810
NCBI-ProteinID:
XP_034641512
LinkDB
All DBs
Position
11:complement(30728765..30802887)
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AA seq
789 aa
AA seq
DB search
MGIVLLFLFFLFLQRNNNVQGNCSPGSAVTCEDCLFSGPQCAWCSQENYTDSSGIHGRCD
TPENLLAKGCQLNFIEFPISKVEIHKNNPLSIGIQKNNSDVTQISPQKLTFRLRPGNEET
IEIKVRQTEDYPVDLYYLMDLSASMDDDLNTIKELGSTLSKEMSKLTSNFRLGFGSFVEK
PVSPFIKTTAEEINNPCRSVPLDCLPTFGYKHVLPLTNDAEKFNEIVKEQKISANIDTPE
GGFDAIMQAAVCKEKIGWRNDSLHLLVFVSDADSHFGMDSKLAGIVIPNDGHCHLDHNNE
YSMSTVLEYPTIGQLTDKLVQNNVLLIFAVTKEQVYLYENYAKLIPGATVGQLQKDSGNI
LQLIIGAYKELRSEVELEVLGDTEGLNLSFTAICNNGTIFPHQRKCSHIKVGETVSFNMT
VSLPTCEKRWRQIVIKPVGLSDALEIDIQLECSCNCQKEAEMNSSKCSKGKGSFECGVCA
CNPGYMGPYCECNENSLSTNSCKRSPEQSSCSGRGDCYCGQCICHFSVYGNIYGPYCECD
NFSCVRFKGLQCGGNGDCDCGECVCHSGWTGEYCNCTTDINSCVSEDGILCSGRGECICG
TCVCTNPGASGSTCERCPTCGDPCSSKRSCIECHLASDVQSEAECNEKCRLVDATVNSAE
DFSKDKSIPCSLQGENECVTTFLMATDEQGRTIIHSIKQKDCPQPPNIPMIMLGVSLAIL
LIGIFLLCIWKLLVSFQDRKEIAKFEAERSKAKWQTGTNPLYRGSTTTFKNVTYKHQEKQ
KVDITADFY
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggggattgtattgcttttcctgttctttctatttctgcaaagaaataacaatgtacaa
ggaaattgttctccagggagtgcagtgacttgtgaagattgtttgttttctggaccacag
tgtgcttggtgttctcaagagaattatacagactcatctggaattcacggaaggtgtgat
actccagaaaatcttttggcaaaaggatgtcagttgaactttattgaatttcccatttct
aaagtagaaattcacaaaaataacccccttagcataggaatccagaagaataactctgat
gtcacacagatttcccctcaaaagttaacttttagactgcgaccaggaaatgaagaaaca
atagagattaaagttcgccagactgaagattatccagttgatctctattacctcatggac
ctttccgcttccatggatgatgatctgaatacaataaaggaattaggctcaactctttcc
aaagaaatgtcaaaactaacaagcaattttagactaggctttgggtcttttgttgaaaaa
ccagtttcaccattcatcaaaaccacagctgaagaaataaacaacccttgcagaagtgtt
ccacttgattgcttacccacctttggatacaaacatgttttgccattaacaaatgacgct
gaaaaattcaatgaaattgtgaaagaacagaaaatctcagctaatatagatactccagag
ggaggatttgatgcaattatgcaggcagctgtttgcaaggaaaagattgggtggagaaat
gactctctacatctgctggtgtttgtgagtgatgctgattcccattttgggatggacagt
aaactggcagggattgttattccaaatgatgggcattgtcacttggaccacaataatgaa
tattccatgtcaacagttttggagtatccaacaattggccaactaacagacaagcttgtg
caaaacaacgttttactaatttttgctgtaacaaaggaacaagtttacttatatgagaat
tatgccaaacttattcctggagctactgttggacaacttcagaaagattctggaaatatt
ctccaattgatcattggtgcatataaggagctacgatctgaagtggagctggaggtgtta
ggagacacagaaggactcaatctctctttcacggcaatctgtaacaatggtaccattttt
ccacaccagaggaaatgttcccatataaaagtgggagagacagtctctttcaacatgaca
gtaagcctacctacctgtgagaaaaggtggaggcagattgtaataaagcctgtgggcctg
agtgatgccctggaaattgatatccagctggaatgcagctgtaactgtcagaaggaggct
gagatgaacagctccaaatgcagcaaaggaaagggctcttttgagtgcggtgtgtgtgcc
tgcaaccctggctacatgggtccttactgtgaatgtaatgaaaactccctgagcacaaat
tcctgtaaaaggtctccagagcagagctcctgtagcgggagaggcgactgttactgcggg
cagtgtatttgccatttctcagtgtatggaaatatttatgggccatactgtgaatgtgac
aatttttcttgcgtgagatttaaaggattgcaatgtggaggtaatggtgattgtgactgt
ggtgaatgtgtatgccacagcggatggactggtgaatattgtaactgcacaactgacatt
aactcctgtgtttctgaggatggaatactgtgcagtggaagaggtgaatgcatttgtgga
acatgtgtttgcacaaatcctggggcttctggtagcacatgtgaaagatgccctacatgt
ggggatccttgtagttccaaacggagctgcatagaatgtcatttggcttctgatgtccag
tcagaggcagaatgcaatgaaaaatgtagattagttgatgcaactgtcaacagtgcagaa
gatttctcaaaggataaatctattccctgctctttacaaggggaaaatgaatgtgttact
acatttctaatggctacagatgaacagggaaggacaatcattcatagcataaagcagaaa
gattgcccacaacctccaaacattccaatgataatgttgggtgtttctcttgctatcctt
ctgattggcatttttctactttgtatatggaaattgctagtttcttttcaagaccgaaaa
gagattgccaagtttgaagcagaaagatcaaaggccaaatggcaaacgggaacaaatccc
ctgtaccgaggctcaacaactacatttaaaaatgtaacttacaagcaccaagaaaagcaa
aaagtggacattactgcagatttctattag
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