Trachemys scripta elegans (red-eared slider): 117884841
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Entry
117884841 CDS
T07347
Symbol
TTC21B
Name
(RefSeq) tetratricopeptide repeat protein 21B
KO
K19673
tetratricopeptide repeat protein 21B
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tst03037
]
117884841 (TTC21B)
Cilium and associated proteins [BR:
tst03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
117884841 (TTC21B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_TT21_2nd
ARM_TT21_C
ARM_TT21_N
ARM_TT21_5th
ARM_TT21
TPR_19
ARM_TT21_4th
TPR_14
TPR_2
TPR_16
TPR_1
TPR_8
TPR_7
TPR_12
TPR_6
ANAPC3
TPR_CcmH_CycH
TPR_11
CFAP70_TPR_C
TPR_Slam
TPR_17
CFAP70_mid_TPR
RMD1-3
TPR_9
TPR_21
TPR_4
CNOT10_TPR
TPR_15
DUF6584
TPR_Psidin_N
Alkyl_sulf_dimr
Fis1_TPR_C
TPR_YpiA_C
DUF5420
RMD9_mid
ARMC9_LisH
SPOB_a
Motif
Other DBs
NCBI-GeneID:
117884841
NCBI-ProteinID:
XP_034641594
LinkDB
All DBs
Position
11:complement(34104755..34210577)
Genome browser
AA seq
1316 aa
AA seq
DB search
MESLTQRALISYYCQEGYFRHVQVAANEALKKFGNDPVFLFYRAYGMMMEGHVQEAIREF
ESIKNKQEVSLCTMMALICAHKKSSNPDRDAILELDAKMKEQRKTAGQQALYFAGLFLWH
LGRQDKAREYVDRMIKVSNGNKEGLILKAWLDLTCGKEAYIKKAVKYFDEGMQDGNDPFA
LLGKAQYFEVRQNFSGALETVNQIIANFPDFLPAFIKKMKLQLALQDWEQAVETAQRLLQ
KDALNLEAIRMEALHFLCREGNIPEATAKLRDLINALDKLEPHNPQLFCKMALAFSRTCG
RNQLILQQTQILVERAFDMASHDSEIATELGYQMILQGKVKEALKWYKTAMVLDETSVSA
LTGIIRCQIIEGQLEDADQQLEFLNEIQQSIGKSGELSFLRAVLAMKKHQRQEEVIHLLN
DVLDTHFSSLHGLPLGIQYFEKLNPDFLLEIVREYLNFCPTQPANPGQPPSPLLKHCASV
LETVVKTVPSLLHAVFLIAKVKYLSGDIEASHSVLQHCLEQNPSYPDAHLLMAQVHLSQN
NFKLCSQSLELCLSYNFEVREHPLYHLIKAQTQKKMGEISEAIKTLQMAMNLPGMRGAVS
FSKSKAKRNEIDASNRVSIFLELVEAHCLNGEQHEAAKVLQDAINEFTGTPEELRVVIAN
ADLALAQGDIEQALTMLRNITSEQPYFVQAKEKMADIYLQYRKEKKLYASCYRDLVDKLP
SSRTFLLLGDAYMNIQEPEEAIEVYEQALKKNPRDGALASKIGKALIKTHNYSKAISYYE
AALKNGQQNILCYDLAELLLKLRQYEKAEKVLQQALDHEPVNELSSLMEDGRYQVLLAKI
YSKMEKTDEAIVSLQQARELQARVLKRVQIEQLDAVPAQKQLVAEICAEIAKHCTAQRNY
EKAIKFYKEALVHCETDNKVMLELARLYLAQDDTDACQHQCTLLLKNDQDNEAATMMMAD
LMFRKQDYEQAVFHFQQLLERKPDNYATLSRLIDLLRRAGKLEEVPRFLVMAEKHSSRAK
LEPGFHYCKGLYLWYTGEPNDALRHFNRARKDSDWGQNAVYNMIEICLNPDNETVGGEVF
ENLDGDIGNSTEKQESVQLAVRTAEKLLKELKPQTIQGHIQLRIMENYCLMATKQKSNVE
QALNTFTEVVVAEKDHIPALLGMATAYMILKQTPRARNQLKRISKMNWNPIDAEEFEKSW
LLLADIYIQSAKYDMAGELLKRCLRHNRSCCKAYEYMGYIMEKEQAYKDAAVNYEMAWKY
GNQTNPTIGYKLAFNYLKGKRYVEAIDICHKVLKAHPNYPKIRKEILDKARASLRT
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
atggagtccttgacgcagcgggcgctgatcagctactactgccaggaagggtacttccgg
cacgtccaggtggctgctaatgaggcgctcaagaagtttggcaacgaccccgtgttcctg
ttctaccgcgcctatggcatgatgatggaaggtcatgttcaggaggctatccgggaattt
gagtctattaaaaacaaacaggaggtgtccctttgtacaatgatggcactgatctgcgcc
cataaaaagagctctaatccagatcgagacgctattttggaactggatgctaaaatgaag
gaacaacgtaagactgcaggacagcaggccttgtactttgcagggttgtttttgtggcat
cttggtcgtcaggacaaagcccgtgaatatgttgatagaatgatcaaagtttctaatggt
aataaagagggattgattttgaaagcttggcttgatctcacctgtggaaaagaagcttat
attaaaaaagctgtgaaatactttgatgaaggaatgcaggatgggaatgacccttttgcc
ctgctgggtaaggcacaatattttgaggtgcgccagaatttttcaggagctttagaaact
gtgaaccagataatagcaaacttcccagacttccttcctgctttcataaagaaaatgaaa
ctacaactagccttgcaggactgggagcaagcagttgaaacagcacaaaggctattgcag
aaagatgctcttaacttggaagccataaggatggaggccctacattttttgtgtagggag
ggtaatatacctgaggctactgccaagctgagagacctaattaatgcattggacaagttg
gaaccacataatcctcaactattttgtaaaatggcattagctttcagcagaacatgtggc
cggaaccaactcatccttcagcagacacagatcttagttgaaagagcatttgacatggca
tcccatgattctgaaattgctacagaacttggctaccagatgattttacaagggaaggtg
aaggaggctttaaaatggtacaagaccgctatggtgcttgatgagacaagtgtttctgca
ctaactggaattatccgatgtcagataattgaagggcaattagaagatgcagatcagcag
ttggaattccttaatgaaattcagcaatcaattgggaaatctggggaactgtctttcttg
cgtgcagttttagctatgaaaaaacatcaaagacaagaagaagttattcatttgttgaat
gatgttctggatactcacttttcatcattgcatggcttacctcttggcatacagtacttt
gaaaaactgaaccctgatttcttgctggaaattgttagagaatatcttaatttttgccca
acacagcctgcaaatccaggacaacccccgtcaccactgctcaaacactgtgcctcagtt
cttgaaactgtggtaaaaactgtaccaagtcttctacatgctgtctttttaattgcaaag
gtgaaatacttatcaggtgatattgaggcatcccacagtgtcctacagcattgtctggaa
cagaatccttcttatccagatgctcatttacttatggctcaggttcatttgtcccaaaac
aattttaaactctgttctcagtccctggaactttgtctgagctacaattttgaggtgaga
gaacatcctttgtatcacttaattaaagcccagacccaaaagaagatgggagaaatatca
gaagctattaagaccttgcagatggcaatgaatttacctggaatgagaggagctgtgtct
ttctcaaaatcaaaagcaaaaagaaatgaaattgatgcaagtaatcgtgtgtctatcttt
ctggaattggtagaagctcattgtctgaatggagaacagcatgaagctgctaaagtactg
caagatgccatcaatgaatttactggcacccctgaagaactacgagttgtgattgctaat
gcagacctggctcttgcacaaggagatattgaacaagccttaactatgctcagaaatatt
acatctgaacagccttactttgtacaagccaaagaaaaaatggcagacatttatcttcaa
tacagaaaagagaaaaaattatatgcaagctgctatagagatctggtggacaaactgcca
agctcacgtacttttcttcttcttggtgatgcatacatgaatattcaagagcctgaagaa
gctatagaagtctacgagcaggctttaaagaaaaatccaagagatggagctttagcaagt
aaaattggaaaagccctaatcaaaactcataactattcaaaggcaataagttattatgaa
gctgcactgaaaaatggtcaacagaatatcctttgctatgatctggctgaactcctgctg
aaactgaggcagtatgaaaaggcggaaaaagttcttcagcaagctttagaccatgagcct
gtgaatgaattatcctctctaatggaagatggacgttaccaagttcttctagcaaaaatt
tatagcaaaatggagaagacagatgaagctattgtgtctttacagcaggctcgggaattg
caagccagagtactcaaacgggttcaaatagagcagctggatgcagttcctgcacagaaa
cagttagtagctgagatttgtgcggagattgcaaaacattgtacagcccagcgaaactat
gagaaagcaattaaattttacaaagaagctctagttcattgtgaaacagataacaaggta
atgttggaacttgcacgtttgtaccttgcacaagatgatactgatgcttgccaacatcag
tgtacactgttactgaagaacgaccaagataatgaagcagctacaatgatgatggctgac
ctgatgttcaggaagcaggactatgaacaagctgtttttcatttccaacagctcttagaa
cgcaaaccagataattatgcaactctatcacgtttaattgatctgttaagaagagctggg
aagctagaagaagttccaagatttcttgtaatggctgagaaacattcctccagagcaaaa
ctcgagccgggttttcattattgcaaaggactgtatctttggtatactggtgaaccaaat
gatgcacttcgacattttaatagagcccggaaggacagtgactggggacagaatgcagtt
tataacatgattgaaatatgtttgaacccagataatgaaactgtaggtggtgaagtgttt
gaaaatctggatggtgacataggtaattccactgagaagcaggagtctgtgcagctggct
gtgagaacagcagaaaaacttttgaaggaactcaagccccagaccattcagggtcacatt
cagcttcgtatcatggaaaactattgcctaatggcaaccaaacagaaatcaaatgttgaa
caagcactaaatactttcactgaagtagtagttgctgagaaggatcatatcccagcactt
ttgggaatggccacagcctacatgattttaaaacaaactccacgagccaggaatcaattg
aaacgcatttcaaaaatgaactggaatcccatagatgcagaggagtttgaaaaaagttgg
ctccttcttgctgatatttatattcaatctgcaaaatatgatatggcaggtgaactatta
aaacggtgtcttcgtcataacaggtcctgttgcaaagcctatgaatatatgggatacata
atggaaaaggagcaagcgtataaggatgcagcagtaaattatgagatggcctggaagtat
ggaaaccaaacaaatccaacaataggatacaagctggcatttaattacttgaaaggaaag
cgatacgtagaagcaattgatatttgccataaggtcttaaaagcacacccaaactaccca
aagatcagaaaggaaatacttgacaaggcccgtgcatctttaaggacttaa
DBGET
integrated database retrieval system
