Trachemys scripta elegans (red-eared slider): 117885121
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Entry
117885121 CDS
T07347
Name
(RefSeq) C-type lectin domain family 1 member A-like isoform X1
KO
K10070
C-type lectin domain family 1 member B
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
117885121
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tst04054
]
117885121
04515 Cell adhesion molecules [BR:
tst04515
]
117885121
04091 Lectins [BR:
tst04091
]
117885121
Pattern recognition receptors [BR:
tst04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
117885121
Cell adhesion molecules [BR:
tst04515
]
Lectins
Selectins and C-type lectins
117885121
Lectins [BR:
tst04091
]
C-Type lectins
NK cell receptors
117885121
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lectin_C
Ly49
Pannexin_like
UL45
Motif
Other DBs
NCBI-GeneID:
117885121
NCBI-ProteinID:
XP_034642178
LinkDB
All DBs
Position
1:complement(134545472..134560301)
Genome browser
AA seq
237 aa
AA seq
DB search
MEDEDGYTILNFRSRNPAFTHEPSGTNKGITPPKAPDVPSESIPLPSKWRCTALILGILC
LTLLVTAGILGIQVTQASHLASASLKNLSQQLELLQAKNANLSEILQQLTHDRGHKCNLC
PENWFWYGQVCYHLSTEWKTWQGSRDYCSSHDSRLLKIENKEELDFIVSLSCRLWIGLSR
NAVNRTWVWDDGAALPTDLFQVSEIYYEGDCVVLEDGKAQSYGCIYHNRCVCKKKSA
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgaggatggatacaccattttaaattttcgttctaggaatccagccttcacc
catgaaccttcaggaacaaacaaaggtatcacaccgcctaaagctcctgatgttcccagt
gaatccatccctttgccttccaaatggcgatgcacagcactgattttggggatcctctgc
ctgacgctgctggtaacagcagggatcttgggtatccaggtgactcaagcatcacattta
gcaagtgcatcactgaaaaatctctcacagcagctagaattactccaagccaaaaatgca
aacctctcagagattctccagcagctgacacatgacagaggccacaaatgcaacctttgc
ccagagaattggttctggtatggacaagtctgttaccacctgtctactgaatggaaaaca
tggcaaggaagtagagattattgttcttctcatgattccagacttcttaaaatagaaaac
aaggaagaactggatttcatagtatcattgtcatgtcgcttgtggattggattatcccgt
aatgcagtgaacaggacctgggtgtgggacgatggtgcagcacttcccactgacttgttt
caagtcagtgaaatttactatgaaggggactgtgtggttttggaagatggcaaagcccaa
tcctatggatgcatatatcataatcgttgtgtttgtaagaaaaaaagtgcttag
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integrated database retrieval system
