Trachemys scripta elegans (red-eared slider): 117885129
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Entry
117885129 CDS
T07347
Symbol
CHRNA1
Name
(RefSeq) acetylcholine receptor subunit alpha isoform X1
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
tst04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
117885129 (CHRNA1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117885129 (CHRNA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tst04040
]
117885129 (CHRNA1)
Ion channels [BR:
tst04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117885129 (CHRNA1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Claudin_2
Motif
Other DBs
NCBI-GeneID:
117885129
NCBI-ProteinID:
XP_034642192
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All DBs
Position
11:complement(39753689..39777793)
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AA seq
456 aa
AA seq
DB search
MKFLYTHLLFFCSAGLILCSEHETRLVEDLFKNYNRVVRPVEDHREAVVVTVGLQLIQLI
NVDEVNQIVTTNVRLKQQWTDVNLKWNPEEYGGLKKIRIPSEIIWRPDLVLYNNADGEFA
IDQFTKVLLEHTGKITWTPPAIFKSYCEIIVTHFPFDQQNCSMKLGTWTYDGTVVVINPE
SDRPDMSNFMESGEWVMKDYRSWKHFVYYACCPDTPYLDITYHFLMQRLPLYFIVNVIIP
CLLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFT
MVFVIASIIITVIVINTHHRSPSTHIMPQWVRKIFIDTIPNVMFFSTMKRPSRDKQEKRI
FTEDIDISEISGKPCPAAVNFHSPLTKNPDVKSAIEGIKYIAETMKSDQESSNAAEEWKF
VAMVIDHLLLGIFMLVCIIGTLAVFAGRLIELNQEG
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcctctacacacacctcctcttcttttgctcagctggtctgatcctgtgctct
gaacatgaaactcgtctagttgaagatttattcaagaactacaacagagtagtgcgcccg
gtggaagatcatcgtgaggctgttgtagtcacagttgggctgcagcttattcagcttatt
aatgtggatgaagtaaatcagattgtaacaaccaatgtacgcctgaaacagcaatggaca
gatgtcaacctaaaatggaatccagaagaatatggtgggttgaaaaaaattcgtatccca
tctgagataatctggcgccccgatcttgttctttataacaatgcagatggtgaatttgct
attgatcaattcaccaaagttcttttagaacatacaggcaagatcacatggacaccacca
gcaatttttaaaagttactgtgaaattatagtcacacactttccatttgaccagcagaac
tgcagtatgaagttgggcacttggacgtatgatggtacagtggttgttataaatccggag
agtgatcgcccagatatgagcaactttatggagagcggcgaatgggtgatgaaagattac
cggagctggaagcactttgtttactatgcctgttgccctgacaccccatatctggatatt
acctaccacttcctcatgcagcgcttgcctctctacttcattgtcaatgtcatcattccc
tgtctgctcttctcgtttttaactgggttagtgttttatctgcccaccgattcaggtgag
aagatgactttgagcatttctgttttgctgtctttgactgtgttccttctggtcattgtg
gagctgattccttctacttcaagtgcagtgcccttaataggcaaatacatgttatttacc
atggtgtttgtcatagcgtcaatcatcattaccgtcattgtaatcaacacccaccatcgc
tccccaagtacccatattatgccacagtgggtgaggaagatctttattgacacaatccca
aatgttatgtttttttcaacaatgaaacgaccatccagggataaacaagaaaaaaggatt
tttacagaagacattgatatttcggaaatctctggaaaaccatgtcctgctgccgtcaac
ttccactccccacttaccaaaaacccagatgtgaaaagtgctatagagggaatcaaatac
attgctgaaacgatgaaatcagaccaagaatccagtaatgctgcagaagaatggaagttt
gttgcaatggtaattgatcaccttctccttggtatcttcatgctggtttgcattattgga
acattggccgtgtttgctggtcgtcttattgaattaaatcaagaaggatga
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integrated database retrieval system
