Trachemys scripta elegans (red-eared slider): 117885143
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Entry
117885143 CDS
T07347
Symbol
NHEJ1
Name
(RefSeq) non-homologous end-joining factor 1
KO
K10980
non-homologous end-joining factor 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
117885143 (NHEJ1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tst03400
]
117885143 (NHEJ1)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
117885143 (NHEJ1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XLF
XLF_CC
XRCC4
Motif
Other DBs
NCBI-GeneID:
117885143
NCBI-ProteinID:
XP_034642220
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All DBs
Position
11:435228..562473
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AA seq
309 aa
AA seq
DB search
MEGSEDLDSNLLTQPWASVCFGESTFIAKACFRETGYVLLISDLSSVWYERADTDVVGKR
SKELNKRLTAHVSSFLNRLSNLMCPLLEGRESDANSFSCQQTSSKLTIHVKSELSGLPFY
WDFHCPAAAVEMISRHLVRPLIRMSLSLQYQLQELASLLVQKDAEIEDYRESGAALSRGR
LRTAPFQEKSFLQKFVDESLPQLCGAGDGQAFTSTLQHLYTAVARQEARAAQKRHHSGDA
KTPELTSSPQLAGEAMDSLVTLGSQQEKVEPPSDLPQSLGATATPSSPAQRARLPVSKAK
RKKAKGLFG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggagggctccgaggatctagacagcaacctcctgacgcagccttgggcttcagtttgc
tttggtgaatccacttttattgccaaggcttgtttcagagaaaccggctacgtcttgctg
atctctgacctcagcagtgtatggtacgagcgtgcagacacggatgtcgttgggaaaagg
tccaaggagctgaacaagcggctgacagcccatgtgtcgtctttcctgaatcgcttgagc
aacctgatgtgccctttgctggaaggaagagagagtgacgccaactccttctcctgccaa
cagacctccagcaaactcaccatccatgtgaaaagtgagctctccggactgcccttctac
tgggatttccactgccccgcagctgctgtggagatgatttcccgtcatcttgtgcggccc
ctcatcaggatgagcctgtcattgcagtaccagctgcaagagctggcatctctcctggtg
cagaaggatgctgagattgaagactacagggagagcggggctgctctcagcagaggacgc
ctgaggaccgcgcccttccaggagaaatcatttctgcagaagtttgtggatgagagtctg
ccccagctgtgcggtgcaggggacggccaggcattcacaagcaccctgcagcatctctac
acggccgtggccaggcaggaggcgagggcagcgcagaagcggcaccactcaggggatgcc
aagaccccagagctcacctcgtctccccagctggctggggaggccatggactcattggtc
acactgggttctcagcaggaaaaggttgagccaccctctgacctgccccagagcctggga
gccacagcgactccctcctctccagcccagagagcccgactgcccgtgtccaaggccaag
aggaagaaggcaaaggggctgttcggctga
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