Trachemys scripta elegans (red-eared slider): 117885167
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Entry
117885167 CDS
T07347
Symbol
ZSWIM2
Name
(RefSeq) E3 ubiquitin-protein ligase ZSWIM2
KO
K15716
E3 ubiquitin-protein ligase ZSWIM2 [EC:
2.3.2.27
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117885167 (ZSWIM2)
Enzymes [BR:
tst01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117885167 (ZSWIM2)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117885167 (ZSWIM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
SWIM
zf-rbx1
ZZ
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-RING-like
RA
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
117885167
NCBI-ProteinID:
XP_034642259
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All DBs
Position
11:complement(47243884..47261611)
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AA seq
654 aa
AA seq
DB search
MGTGINGRASVAVVAPPPAPSRAPAMSRRRCASAGLSWQQDQALGSTMRIVRELGPTGFV
LQEEGGPAHRVFLGEPHSCTCAMFLREKDLCSHICWILLKKFKIPRNHEYAFQLGLLEGE
INDILQQEQTLPPRANTLSTKTLQKEDDGYINQKEIDAEDVCPICQEELLKKMFPITYCR
YGCGNNVHITCMKIWADHQGELESDSVVKCPLCREEFAPLKLILEEFRNSTQLVTAAEKV
RLDKHLGLPCNNCRAFPIEGKCYKCTECSEYHLCHECFTSFCHPPHVFTFRQKRNQKWRS
LDQVSQLSTSGGNLKSVNPGDNSKEEMLHLQEKSSCIPKHIVKSLPLMLIRKCSNFLAPG
LQCRLCLKIFCLGQYARLLPCNHKFHRECIDNWLLHQKNACPIDGYIVYNPLTWKDISAN
RDVNQPGSQTNTTKLAKQMEPELFIPGIGLFFKQTLLGHPLEKSQDSLQRLHNNKAPPHS
QQGLILNGISYFHLGDSDSSQHSIDRNLNLQFSRHGKDLAHKPFQKTLSQKSYSVTSRKD
AISNSTRGLNGTCTNKEKGAEVCYDHANPNKVVSFEDRNNHDISACVRFPGKLNFEDNLG
GTIDCTFPKGDSKCVGKASQQRRLLARPPKRKPLGLKTTEVALFMEGIPLHNKS
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggggaccggcatcaacggcagagcgtctgtggcggttgtggcccctccacctgctccc
agccgggcccccgccatgtcccggcggcggtgcgcaagcgccgggctgagctggcagcag
gaccaggcgctgggcagcaccatgcgcatcgtgcgggagctgggccccaccggcttcgtg
ctgcaggaggagggagggcccgcgcaccgggtgttcctgggggagccgcactcctgcacc
tgcgccatgttcctgagggagaaggacctgtgcagccacatctgctggatattgttgaaa
aaattcaaaattccaagaaaccatgaatatgcttttcagctgggtcttctggaaggagag
atcaatgatatacttcagcaagaacagacactccctccaagagcaaacactctctccacc
aaaacattacagaaagaggatgatggatacattaatcagaaagaaattgatgcagaggat
gtctgtcctatttgccaggaagagttactaaagaaaatgtttcccatcacttattgcagg
tacggatgtggaaacaatgttcacatcacatgtatgaagatttgggctgatcaccagggt
gaattagagagtgactctgtggtgaagtgtcccctctgtagagaagaatttgcaccatta
aagctcattttagaagaattcaggaactccactcagcttgtgactgcagcagagaaagtc
agacttgacaaacaccttggacttccctgtaataactgcagagcatttccaattgaggga
aaatgctacaagtgcactgagtgtagtgaatatcacctatgccatgaatgcttcactagc
ttttgccatcctccacatgttttcacctttcgacagaagagaaatcagaagtggaggtca
cttgaccaagtttcacaattgtcaacttcaggaggaaatttaaaaagcgttaatccaggc
gataattctaaagaagagatgttacatcttcaggagaagtccagttgcatcccaaagcac
attgtaaaatctttacctctgatgttgattagaaaatgtagcaactttcttgctccaggt
ttgcaatgtaggctctgcttgaagatcttttgtcttggtcagtatgcaagactcttgcca
tgtaatcacaagttccacagagaatgtattgacaactggttattgcaccaaaaaaatgca
tgtcctattgatggatatattgtatataatccattaacctggaaggatatatccgccaat
cgtgatgttaatcagccaggatctcaaacaaatactaccaaacttgcaaagcagatggaa
ccagagcttttcatacctggaattggattgttcttcaagcaaacattattaggccaccca
cttgaaaaatctcaagatagcctccaaagacttcataacaataaagccccaccacattct
caacagggtttaattttaaatggtataagctactttcatttaggagattctgattctagt
cagcacagcattgatagaaatttaaatctgcaattttccaggcatggtaaggatttagcc
cataagcctttccagaaaacactctctcaaaaatcctattctgttacatctagaaaagat
gcgatttctaatagtacgagaggcttaaatggaacttgtacgaataaagaaaaaggagca
gaagtgtgctatgaccatgctaacccaaacaaagtagtttcttttgaagacaggaataac
catgacatttcagcatgtgtaagatttcctgggaaattgaactttgaggataatttgggg
ggtacaattgactgtacgttcccaaaaggggacagtaagtgtgtgggaaaagccagtcag
cagagaagacttctagcaagaccacctaagcgtaagcctctgggccttaaaactacagaa
gtagctttattcatggaaggaattccactgcacaacaagtcataa
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