Trachemys scripta elegans (red-eared slider): 117885205
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Entry
117885205 CDS
T07347
Symbol
YBX3
Name
(RefSeq) Y-box-binding protein 3 isoform X1
KO
K06099
cold shock domain protein A
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117885205 (YBX3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117885205 (YBX3)
03041 Spliceosome [BR:
tst03041
]
117885205 (YBX3)
Transcription factors [BR:
tst03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, DbpA-like
117885205 (YBX3)
Spliceosome [BR:
tst03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117885205 (YBX3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
117885205
NCBI-ProteinID:
XP_034642324
LinkDB
All DBs
Position
1:136281046..136317841
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AA seq
354 aa
AA seq
DB search
MSEAAQTSPTAAAPPSPTGPPTAAPASPAQDAKPRSPASPSAPAGSASGDAAPAAPASDS
SSAAPAADTEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLR
SVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRGYYGRRRGPPRNYP
GEEEEEEGSGSSEGLDPLITEGHIPGSRNQLRRPQYRQRFFPPYRSGQTFDRRSRVYSHA
DGTQGGDGEIKDGVPEGAQLHQQIHRNPSYRARYRRGPPRPRPAPVVGEAENKENQHEAN
AMSQQPSRRGYRRPYNYRRRPRPPNAASQDGNETKVAETPAENPAPVTEQSSAE
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggcggcgcagaccagccccacggcggcggcccccccatcccccaccggcccc
cccaccgccgcgccggcctccccggcccaggacgccaagcccaggagccccgctagcccc
agcgccccggcgggcagcgccagcggagacgcggcccccgccgcccccgccagtgacagc
agcagcgcggcccccgccgcggacacggagaagaaagttctggccactaaagttcttggc
actgtcaagtggttcaacgtcagaaacggatatggctttatcaacagaaatgacacaaaa
gaagatgtgtttgttcatcagaccgcgatcaagaagaacaacccacggaaatacctacgc
agtgttggtgatggagaaactgtagaatttgatgtggtcgagggagagaagggtgcagaa
gcagctaatgtcactggtccagatggagtccccgtggaaggcagtcgttatgctgcagac
agacgccgttatcgacgtggctattatggcagacgccgtggaccacctcgtaattacccg
ggtgaggaggaggaggaggaggggagcgggagcagtgaaggattggatcctctcatcacc
gaagggcatatcccagggtcacggaaccagctgcgccgcccacaataccggcagcgcttc
ttcccaccttaccgctcgggacagacctttgaccgccgctcacgggtctattcccatgct
gatggcacgcagggtggtgatggagaaatcaaggatggggtcccagaaggagcacagctt
catcagcaaatccatcggaatccctcctatcgcgcacgctatcgcaggggacccccacgt
ccacgccctgcaccagtggtcggagaggctgaaaacaaggagaaccagcacgaggctaat
gctatgagccagcagccatcccgtcgtggataccggcgcccatacaattatcggcgccga
ccccgcccgcccaatgctgcatcccaagatggcaatgagaccaaggtggccgaaacacct
gctgagaaccctgctccagtgaccgagcagagcagtgctgaataa
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integrated database retrieval system
