Trachemys scripta elegans (red-eared slider): 117885610
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Entry
117885610 CDS
T07347
Symbol
CLSTN3
Name
(RefSeq) calsyntenin-3
KO
K22661
calsyntenin 3
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tst04515
]
117885610 (CLSTN3)
Cell adhesion molecules [BR:
tst04515
]
Cadherins
Cadherin related
117885610 (CLSTN3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
SMN_G2-BD
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
117885610
NCBI-ProteinID:
XP_034642779
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All DBs
Position
1:complement(138742812..138769278)
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AA seq
974 aa
AA seq
DB search
MGCPRPLASLFFLCALLLGSFCNKANKHKPWIESEYQGIVMENDNTVLLNPPLFALDKDA
PLRYAGEICGFRIHGAGVPFEAVILDKATGEGLIRAKEPMDCEAHKEHTFTIQAYDCGEG
PDGTNTKKSHKATVHVRVNDVNEFAPVFVEKLYRVAVTEGKLYDRILRVEAIDGDCSPQY
SQICYYEILTPNIPFLIDNDGNIENTEKLQYSGEHLYKFTVTAYDCGKKRASDDAEVEIQ
VKPTCKPSWQGWNKRIEYTPGAGSLALFPSIHLETCDEPLWNIQATVELQTNHVAKGCDR
DNYSEKSLRKLCGAASGEVDLLPVPSPLANWTARLSVHYSQDSSLIYWFNGSQVAQVPVG
SGMGAHEGLSDHFTLSLWMKHAVVPGKGKKEEETVICSTVQSEDGYSHYSLAVHGCRIAF
LYWPLLESARPVKFLWKLEQVCDDEWHHYALNLEFPTVTLYVDGVSYDPALIHDNGLIHP
PRRELTLMIGACWVEEKNKEKIRGNENSTDPMQGDPLLIHHYFHGYLAGFTMRPGSLESR
EVIECLYACREGLDYSDFDSLGKGMKVHVNPSQSLLTLEGDDVETFNHAIQHVVYMNSLR
FATPGVRPLKLTTTVKCFSEESCVSIPDVEGYVVVLQPDAPQILLSGNTHFARPASDFEN
PDGVPLFPDLQVTCSISHQVKAKKDESWHGTVTDTRMSDEIVHNLDGCEISLVGDDLDPE
REYLILDGASLQQRGLELINTSAYFTITGVESIAVYEEILHQVSYHIRHGAALYERKFRL
SCTEMNGRYSSNEFTVEVNVLHNMNRAAHPNHILSSQQFMHQGHHLPPELSGHSLANVHR
NSMVPSAATTIIIVCVGFLALMVILGILRIHSLHRRGAGHKAPGAAGGGHAGTSSKESDM
FWDDSALTIIVNPMESYQSCQERAAESGETRAVEEVEEEEENDDSSDSDTPDTPGSDDGD
DQRIVGKRDGPCCY
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcccgcggcccctcgcctccctcttcttcctatgtgccttgctcctcggcagt
ttctgcaacaaagcaaacaagcacaaaccctggattgagtctgaataccagggcatcgtc
atggagaatgataacacagtcctgctcaacccaccgctatttgctctggacaaggatgca
ccactgcgctatgcaggtgagatctgcggctttcggatccatggggcaggggtgcccttt
gaagctgtgatcctggacaaggccacgggtgaggggctgatccgagccaaggagccgatg
gactgcgaagcgcacaaggagcacaccttcaccatccaagcatacgactgtggagaggga
cctgatgggaccaacaccaagaaatcccacaaggccaccgtgcacgtgcgggtgaatgac
gtgaatgagtttgctccggtctttgtggagaagttataccgtgtggcagtgaccgagggg
aaactctatgaccgcatcctgcgggtggaggccattgatggagactgctccccccagtac
agccagatttgctactatgagattctcacccccaacatccccttcctgattgacaatgat
gggaacattgagaacacagagaagctgcaatacagtggagagcacctatacaagttcaca
gtcacagcctacgattgtggcaagaagcgggcatctgatgatgctgaagtggagatccaa
gtgaagcccacttgcaaacccagctggcagggctggaataagcggattgagtacacgcca
ggtgcaggtagtctggcactgtttcccagcatccacctggagacatgcgatgagccgctg
tggaacatccaagctacagtggagctgcagacaaaccacgtggccaagggatgtgaccgt
gacaactactcggagaagtcgctgcgcaaactctgcggtgctgcctcaggtgaggttgac
ctgctgcctgtgcccagcccccttgccaactggacggcacggctctcagtgcattacagc
caggacagcagcctcatctactggttcaatggcagccaggtggcccaggtgcctgtgggc
agtgggatgggtgctcatgaggggctcagtgaccacttcaccctgtcactgtggatgaaa
catgctgtggtgcctgggaagggcaagaaggaggaggagactgtgatctgcagtacggtg
cagagtgaggatggctactctcactactccctggctgtgcatggctgccgaattgctttc
ctatattggcctttgctggagagtgcgagacctgtcaaatttctgtggaagctggagcag
gtctgtgatgatgaatggcaccattatgccctcaacctggagttccccaccgtcacgctc
tatgtggatggtgtgtcctacgaccccgcgctcatccatgacaatggcctcatccatccc
ccaaggcgggaacttaccctcatgatcggagcctgctgggttgaggaaaaaaacaaagag
aaaatcagggggaacgagaactccacagatcctatgcaaggagaccctctgctgattcac
cactacttccatggttacctggctggcttcaccatgcgccccggcagcctggagagccgg
gaggtgattgagtgcctctacgcctgccgtgaggggcttgactacagtgactttgacagc
cttggcaaagggatgaaggttcatgttaatccctcacagtccctgctcacactggagggt
gatgatgtggaaaccttcaaccatgcaatccagcatgtggtttacatgaactcactgcgc
tttgccacgcctggagtccggccgctcaagctcaccaccactgtcaaatgcttcagtgaa
gaatcatgcgtctccatccctgatgtggaaggctacgtggtggtgctgcaacctgatgcc
ccccagatcctgctgagtggtaatactcactttgctcgtcctgcatcagactttgagaac
cctgatggggtccccctgttccctgacctccaggtcacctgctcaatctctcaccaggtg
aaggccaagaaggatgagagctggcatggcacggtgacagacacacgaatgtcagatgag
attgtccacaacctggatggctgcgagatctccctggtgggagatgacctggacccggag
agggaatacctgatcctggatggagcatccctgcagcagcggggcctggagctcatcaac
acctctgcctacttcaccatcacaggcgtggagagcattgcagtatacgaggagatcctc
caccaggtctcataccacatccgccatggcgctgccctctatgagaggaaattccgcctt
tcctgcactgagatgaatggacgctactccagcaacgagtttactgttgaggtgaacgtc
ctccacaatatgaaccgggctgctcatcctaaccacatcctcagctcccagcaattcatg
caccaaggtcaccacctaccaccagaactatctgggcacagcctggccaacgtccatcgc
aactccatggtccccagcgcagccaccaccatcatcatagtgtgtgtgggcttcttggca
ctcatggtcatcctgggcatcctgcgcatccactctctgcaccgccggggggctgggcac
aaggccccaggggctgccgggggaggccatgcaggaaccagcagcaaggagagcgacatg
ttctgggatgactcagccctcaccattatcgtcaaccccatggagtcataccaaagctgc
caggagagggcagcagagagtggggagaccagagctgtagaggaagtggaggaggaggag
gagaatgatgacagcagtgactcagacacaccggacaccccaggcagcgatgatggagat
gaccagcgcatcgtgggcaaaagagatggcccctgctgctactag
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