Trachemys scripta elegans (red-eared slider): 117885616
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Entry
117885616 CDS
T07347
Symbol
RBCK1
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform X1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04217
Necroptosis
tst04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117885616 (RBCK1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117885616 (RBCK1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117885616 (RBCK1)
Enzymes [BR:
tst01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
117885616 (RBCK1)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
117885616 (RBCK1)
Multi subunit type E3
LUBAC complex
117885616 (RBCK1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-RING_2
IBR
Zn_ribbon_RanBP
zf-RING_11
IBR_1
Motif
Other DBs
NCBI-GeneID:
117885616
NCBI-ProteinID:
XP_034642789
LinkDB
All DBs
Position
12:2681896..2695948
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AA seq
528 aa
AA seq
DB search
MGTKYVEETAKKAEELALKLAKAIEGGDKELARECAGWLAEQRVPVTVQVKLEAYPKKEI
SLWVGVEDAQMTTVPIYLQVNPHMTLASLKDMVFLHYGFPPSVQQWVVGKRLPGDQETLH
YNGIQRDGDMAYLYLRSAKEAKLSKETFQRERQRRVLAELGFGDISLQPRGSQEPADVGL
GAGVQEQDSLCMEELRHELSQVEAALPPEPPKVGWVCPSCTYVNKPTRPGCEICCKERPE
DYAVPPAYQPDEEELARMRNEEEAMRQSLQVTEQQKIENYQHILQVDRQSLVPAAEVIEC
PICFVTLQPGKGVTLRECLHSFCRDCLKGTILNSLEPEVPCPYIDEKYSCTGQLLEREIK
ALLSAAEYQRFLDLGVSIAENRSQSSYHCKTTDCRGWCIFEDDVNEFACPVCQKVNCLLC
KAIHETMNCKEYQDDLKRRAQNDQTARQTTEMLTLMVQSGEAMHCPTCKIVVQKKDGCDW
IRCTVCHTEICWVTKGPRWGPAGPGDTNGGCRCRLNGAPCHPQCHNCH
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggggacgaaatatgtggaggagacggcgaagaaagcagaggagctggccctgaagctg
gctaaggccatcgagggcggggacaaggagctggcacgggagtgtgctggctggctggcc
gagcagcgggtgcccgtgacggtgcaggtgaagctggaggcctaccccaaaaaggaaatc
agcttgtgggtgggagtggaggatgcccagatgaccacagtccccatctacctgcaagtc
aatcctcatatgactttggcttctctgaaggacatggtattcctccactacggcttccca
cccagtgttcagcagtgggtggtgggcaagaggctccccggagaccaggagaccctgcac
tacaacggcatccagcgagatggtgatatggcctatctctacctcaggtctgccaaagag
gccaagctcagcaaagagacattccagagggagcggcagcgccgagtcctggcagaactg
ggcttcggcgacatcagcctgcagcctcgtgggagccaggaaccggcggacgtggggctc
ggagccggggtgcaggagcaggacagcctgtgcatggaggagctgaggcatgagctctcg
caggtggaagccgccctgccccctgaaccccccaaggtcggctgggtctgtccgagctgc
acctacgtcaacaagcccacccgccccggctgcgagatctgctgcaaggagcggcccgag
gactacgcggtgcccccggcttaccagccggacgaggaggagctggcgaggatgaggaac
gaggaggaagctatgaggcagtccctacaggtgacggagcagcagaagatcgagaactac
cagcacatcctgcaggtggacaggcagagcctggtgcctgccgctgaagtgatcgaatgt
cccatctgctttgtgaccctgcagcctggaaagggggtgaccctgcgggagtgcctgcac
tccttctgcagggactgtctgaaggggacgatcctgaacagcttggagccggaggtgccc
tgcccgtacatcgacgagaagtactcctgcacgggacagctgctggagcgtgagatcaaa
gcgctcctgagtgctgccgaataccagcgcttcctggacctgggcgtctccatcgccgag
aaccgcagccagtccagctaccactgcaagaccacggattgtcggggctggtgcatcttc
gaggatgacgtgaacgagtttgcctgccccgtgtgccagaaggtgaactgcctgctctgc
aaggccattcacgagaccatgaactgcaaggagtatcaggacgacctcaagcgccgggct
cagaacgaccagactgccaggcagaccaccgagatgctgacgctgatggtccagagcggg
gaggctatgcactgtcccacctgtaagatcgttgtccagaagaaggacggctgtgactgg
atccgctgcactgtctgtcacactgagatctgctgggtgaccaaggggccgcgctggggg
ccagcgggcccgggcgataccaacggtggctgccgctgcaggctgaacggcgctccttgc
catccccagtgtcacaactgccactga
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