KEGG   Trachemys scripta elegans (red-eared slider): 117885637
Entry
117885637         CDS       T07347                                 
Symbol
VAPB
Name
(RefSeq) vesicle-associated membrane protein-associated protein B/C isoform X1
  KO
K10707  vesicle-associated membrane protein-associated protein B
Organism
tst  Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:tst00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tst04131]
    117885637 (VAPB)
Membrane trafficking [BR:tst04131]
 Autophagy
  ER-phagy
   Other ER-phagy associated proteins
    117885637 (VAPB)
  Other autophagy associated proteins
   ER-mitochondria tethering complex
    117885637 (VAPB)
SSDB
Motif
Pfam: Motile_Sperm DUF3671 Ig_CFAP65_4th DUF2956 Com_YlbF Cep192_D3 ZapB Cep192_D6 IF2_N ATP-synt_G LcrG HEPPP_synt_1 ASH YabA
Other DBs
NCBI-GeneID: 117885637
NCBI-ProteinID: XP_034642853
LinkDB
Position
12:complement(11078713..11122453)
AA seq 242 aa
MAKVEQVLSLEPQHELKFKGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGI
IDAGTSINVSVMLQPFDYDPNEKSKHKFMVQSMFAPTDTSDMEAVWKEAKPEELMDSKLR
CVFELPAENDKPHDVEINKIISTTAKTESSVMSKSISSSLDDTEVKKVMEEYKRLQVEVQ
RLREENKQFKEEDGLRMRKAPQTNNPISASATAVKEEGLSTRLLALVVLFFIVGVIIGKI
AL
NT seq 729 nt   +upstreamnt  +downstreamnt
atggcgaaagtggagcaggtcctgagcctcgaaccgcagcacgagctgaaattcaaaggt
cccttcacagatgttgtcactacaaacctgaaacttggtaatcctacagacagaaatgtg
tgcttcaaagtgaaaactacagcaccacgcagatactgtgtaaggcctaacagtggaatt
attgatgcaggaacatcaattaatgtttctgtgatgctacaacctttcgattacgaccct
aacgagaaaagtaaacacaagtttatggtacagtctatgtttgctccaactgatacttca
gatatggaagcagtatggaaagaagcaaaaccagaagaactcatggattctaaacttaga
tgtgtatttgagctaccagcagaaaatgataaacctcatgatgtagaaataaataaaatt
atatccacaactgcaaagacagaatcctctgtaatgtctaaatcaataagttcttccttg
gatgacactgaagttaagaaagtaatggaagaatataagaggcttcaagtagaagttcag
aggttacgggaggagaataaacagtttaaggaagaagatggtctgcggatgaggaaggct
ccccagacgaacaacccaatatctgcatctgcaactgctgtcaaggaggaagggctcagc
actagactacttgctctggtggttttgttctttatcgttggtgtaattatagggaaaata
gccttgtag

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