Trachemys scripta elegans (red-eared slider): 117885851
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Entry
117885851 CDS
T07347
Symbol
PTPRT
Name
(RefSeq) receptor-type tyrosine-protein phosphatase T isoform X1
KO
K13297
receptor-type tyrosine-protein phosphatase T [EC:
3.1.3.48
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tst01009
]
117885851 (PTPRT)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
117885851 (PTPRT)
Protein phosphatases and associated proteins [BR:
tst01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
117885851 (PTPRT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
Tc-R-P
PTPlike_phytase
Y_phosphatase3
Pur_ac_phosph_N
TM_ErbB1
PTP_tm
ig
Ig_3
PTP-NADK
Ig_2
I-set
Motif
Other DBs
NCBI-GeneID:
117885851
NCBI-ProteinID:
XP_034643250
LinkDB
All DBs
Position
12:23128815..23835925
Genome browser
AA seq
1491 aa
AA seq
DB search
MNRIATIVFLVQLLQKAEGQVFPGGCSFDEHYSNCGYSVALGTNGFTWEQLNTWEKPTMD
PAVPTGSFMMVNSSGRASGQKAHLLLPTLKENDTHCIDFHYYLSSRDRSSPGSLNVYVKV
NGGPQGNPIWNVSGIVTEGWVKAELAISTFWPHFYQVIFESVSLKGHPGFIAVDEVRVLA
HPCRKAPHFLRLQNVEVNVGQNATFQCIAGGKWSQHDKLWLQQWNGRDTALMVTRVVNHR
RFSATVSVADTSQRSISKYRCVIRSDGGSGVSNYAELIVKEPPTPIAPPELLAVGATYLW
IKPNANSIIGDGPIILKEVEYRTTTGNWVETHIVDSPNYKLWHLDPDVEYEIRVLLTRPG
EGGTGPPGPPLTTRTKCADPVHGPQSMEVVDIRSRQLTLQWEPFGYAVTRCHSYNLTVQY
QYVFNQQKYEAEELIQTSSHYTLRGLRPFMTIRLRLALSNPEGKMESEELVVQTEEDVPG
PVPLESIQGGPFEEKIYVQWKPPNETNGIITLYEITYKAVGSLDPSADLSSQRGKIFKLR
NETHHLFVGLYPGTTYSFTIKASTVKGFGPPITTRIATKISAPSMPEYDTDSPLNETDTT
ITVMLKPAQSRGAPVSVYQLVVKEERLQKARRAADIIECFSVPVSYKNASSLDSPHYFAA
ELKPINLPVTQPFTVGDNKTYNGYWNAPLSPLKSYSIYFQALSKANGETKINCVRLATKA
VLARQQVTTRNPPSLLSTGASTQNSNAVEPEKQADNTVKMAGVIAGLLMFVIILLGAMLT
IKRRRNAYSYSYYLKLAKKQKETQSSTQREMGPVATSDKNTTKLSAVHNEEAFSSSCQDV
NGFTSSSPCSFSVQSKTLQSKSLLNSYYSVSSDTVPSTALLESSHGEMTQPTLTIQTHPY
RSCEPVEMSYPRGQFQPAIRVADLLQHITQMKRGQGYGFKEEYEALPEGQTASWDTAKED
ENRNKNRYGNIISYDHSRVRLQLLDGDPHSDYINANYIDGYHRPRHYIATQGPMQETVKD
FWRMIWQENSASVVMVTNLVEVGRVKCVRYWPDDTEVYGDIKVTLIETEPLAEYVIRTFT
VQKKGYHEIREIRQFHFTSWPDHGVPCYATGLLGFVRQVKFLNPPEAGPIVVHCSAGAGR
TGCFIAIDIMLDMAENEGVVDIFNCVRELRSQRVNLVQTEEQYVFVHDAILEACLCGNTA
IPVCEFRSIYYNISRLDPQTNSSQIKDEFQTLNIVTPRVRPEDCSIGLLPRNHDKNRCMD
VLPLDRCLPFLISVDGESSNYINAALMDSHKQPAAFIVTQHPLPNTVPDFWRLVFDYNCS
SIVMLNEMDAAQLCMQYWPEKTSCCYGPIQVEFVSADIDDDIINRIFRICNMARPQDGYR
IVQHLQYIGWPAYRDTPPSKRSLLKVVRRLEKWQEQYDGRDGRTVVHCLNGGGRSGTFCA
ICSVCEMIQQQNIIDVFHIVKTLRNNKSNMVESLEQYKFVYEVALEYLSSF
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atgaaccggattgccactattgtctttctggtgcagctgttgcaaaaagcggaggggcag
gtcttcccaggtggttgttcctttgatgaacactacagtaactgtggttatagcgtggca
ctggggaccaatggatttacctgggagcagctcaacacctgggaaaagccaacgatggat
cctgctgtcccgactggttccttcatgatggtgaatagctctggacgggcatctgggcag
aaagctcacttgctattgcccaccttgaaggaaaatgacactcactgcatcgactttcac
tactacctgtctagcagagaccgctccagccctggctcgttgaatgtctacgtgaaggtt
aacggtggaccacagggcaaccccatctggaatgtgtcggggattgttactgaaggttgg
gtgaaggcagagcttgccatcagtacattctggccacacttttatcaggtgatatttgaa
tccgtgtctttgaagggacatccggggttcatagctgtggatgaagtcagagtccttgcc
catccatgcagaaaagcgcctcacttcctgcggctgcagaatgtggaggtcaacgtgggc
cagaatgcaacattccagtgcatcgccggggggaagtggtctcagcacgacaaactctgg
ctccagcagtggaatggaagggacaccgcgttaatggtcaccagggtggtcaaccacaga
cggttttctgctacagtcagcgtagcagacacgtctcagcgcagcatcagcaaataccgg
tgtgtcattcgctcagatggtggctctggcgtttcaaactatgcagaattaattgtgaaa
gaacctcccacgcccattgcgccccctgaactgctggctgtcggcgccacctatctgtgg
atcaaacccaacgccaattctatcatcggagatgggcctataatattgaaggaggtggag
taccgtacaaccactgggaactgggtagaaacacacatcgtagactcaccaaattacaaa
ctgtggcacctggaccccgatgtggagtatgagatcagagtgctcctcacccgtcctggt
gaagggggcacagggccccctgggcctccactcacgacaagaacaaaatgtgcagatcca
gtccatggaccgcagagtatggaagttgttgacatccgctcccggcagctgaccttgcaa
tgggagccctttggttatgcggtgacccgttgccacagctacaacctaacagtccagtac
cagtacgtgtttaaccagcagaagtacgaagcagaggaactcatccagacatcctcacat
tataccttgcgaggccttcggcccttcatgaccatccggttgagactagcactttctaat
ccagagggcaaaatggaaagcgaggagctggtggtacagactgaagaggatgttcctgga
cctgttcccctagaatctatccaaggaggaccctttgaagaaaagatctatgttcagtgg
aagcctccaaatgagaccaatggtatcattacactctatgagataacatacaaagctgtt
gggtccttagatcccagtgctgacttgtccagccagaggggaaagatcttcaaactaagg
aatgaaactcaccacctctttgtagggttatatccaggtactacctattcgttcaccatc
aaagccagcacagtgaagggcttcgggcctcccatcacaacacggatcgcaactaaaatt
tcagcaccatctatgcctgaatacgacacggactcccccttgaatgaaacggacactacc
atcacagtcatgttgaagcctgctcagtcccgtggagcacctgtcagtgtctatcagctt
gttgtcaaggaagagaggctgcagaaagcacggagggctgcagacatcattgagtgcttc
tctgttccagtgagctacaagaatgcttccagccttgactcaccccattactttgcggcc
gagctgaagcccatcaatctgcccgtcacgcagccctttacagtgggcgacaacaagacc
tacaatggctattggaatgctccactctcaccactgaaaagctacagcatctacttccag
gctctcagcaaagcaaacggagagaccaaaatcaactgtgtccgactggcgacaaaagca
gtactagctaggcaacaggtgaccacacgaaacccgcccagcctcttgagcacaggagct
tccacccagaattccaatgcagtggagcccgaaaagcaagctgacaacacagtgaaaatg
gctggggttatagctggccttctgatgtttgttattatcctcttaggagcaatgctcacc
atcaaaaggagaagaaatgcatattcctactcctattacttgaaactagcgaagaagcag
aaggagactcaaagcagcactcagagagagatgggtcccgttgctacttcagacaagaac
accaccaaactcagtgcagttcacaatgaagaagctttttcttccagctgtcaagatgtt
aatggattcacatcatcctctccttgttcattttctgtccaaagcaaaacccttcagagc
aaatctttgttgaattcctactactcagtatcatcagacactgttccatcgactgcgctg
ctagagagcagccacggggaaatgacccagccaactctgaccatccagacccatccgtac
aggagctgtgagccagtggaaatgtcctaccccagggggcagttccaaccagccatccga
gtggccgacttgctacagcacatcacccagatgaaacgaggacaaggctatggatttaaa
gaggagtatgaggctctacccgaggggcagacggcatcttgggatacggccaaggaagat
gaaaaccgcaataagaatagatatgggaacatcatctcctatgatcattcaagagtgaga
ctgcagctgttggatggagaccctcactcagactacataaacgccaactacatagatgga
taccaccgccctcgtcactatattgcaactcaaggtcccatgcaagagacggttaaggat
ttctggagaatgatttggcaggagaattctgcaagtgttgtcatggtcaccaacctggtg
gaagttggcagggtgaaatgtgttagatactggccagatgacacagaggtctatggagat
attaaagtcacattaattgagacagagccattggcagagtacgtcatacgcacatttact
gtacaaaagaaaggctaccatgagatccgagagattcggcagttccactttaccagctgg
ccagaccacggggttccttgctatgccacaggcctcttgggctttgttcggcaggtgaag
ttcctcaatccgcctgaggcggggcctatagttgtgcactgcagcgctggtgctggaagg
acagggtgctttattgccattgacatcatgcttgacatggcagagaatgaaggtgttgta
gacatatttaactgtgtgcgagagctacgatcccagagggtcaatttggtacaaacagag
gagcagtatgtctttgtacatgatgccattctagaggcatgtctctgtggcaacacagca
attccggtttgtgagttccgatccatatattacaacatcagcagactggatccgcagaca
aattccagccagataaaagatgaatttcagaccctcaacattgtgacaccgcgtgttcgg
ccagaagactgcagcattggcctcttaccaagaaaccatgacaaaaatcgctgcatggat
gtgctgcccttggaccggtgcctccctttccttatctctgtagatggcgaatcgagcaac
tacatcaacgctgcactcatggatagccacaagcaacctgctgcctttattgttacccag
caccctttacccaacactgtaccagatttctggaggctggtgtttgattacaactgctcc
tccatagtgatgctgaatgaaatggatgctgcacagctctgcatgcagtactggccagag
aaaacgtcctgttgttatggtccaatccaggtggagtttgtttcagcagacattgatgac
gacatcatcaataggatattccgtatctgcaacatggccaggccccaggatggatatcgt
atagtacagcatttgcagtacattggctggccagcataccgggacactcctccatccaaa
cgctccctcctgaaggtggtcagacggctagagaaatggcaggagcagtacgatgggaga
gatggacgcactgttgtccactgcctgaatggtggtggacgcagtggcaccttctgtgcc
atctgcagcgtgtgtgaaatgattcagcagcaaaatatcattgacgtgttccacatagtg
aagacgttacgaaataacaaatccaatatggtggagtcactggaacaatataaatttgta
tatgaggttgcactggaatacttgagttcgttttag
DBGET
integrated database retrieval system
