Trachemys scripta elegans (red-eared slider): 117885945
Help
Entry
117885945 CDS
T07347
Symbol
NOP2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tst03009
]
117885945 (NOP2)
Enzymes [BR:
tst01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
117885945 (NOP2)
Ribosome biogenesis [BR:
tst03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117885945 (NOP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
Methyltransf_25
PCMT
FtsJ
Methyltransf_15
Ubie_methyltran
Motif
Other DBs
NCBI-GeneID:
117885945
NCBI-ProteinID:
XP_034643416
LinkDB
All DBs
Position
1:139718535..139730569
Genome browser
AA seq
688 aa
AA seq
DB search
MGRKLDVLRKEKRGPGRKARKQKGAEVELAKFLPPATDNSGNKLSSHARKRAAKRRMGSG
KTQARKNLLQLKKPTDKGGMDGTSTAAEQPSPQKGGRSRGPAEGASRHPQLGCSDRCSLS
LTPAKRSQPAGDNEEERLESSESEGDEDVDAWENMGDDGSNEEMVDDYGASSSEEEELLP
IEQAVRKQKSGREGLSEDDSEDEEEWVSSRSKGQEEEEDTDLQLNMEIDEQFVLPSGEEI
ERETAEPPDLHLVHQRIKDNVEVLQDFRVKREAGRARQEYLALLHQDLAAYYSYSDFLLK
KLMELFPLPELVNFLESNEVPRPMTLRTNTLKTRRRDLAQALINRGVNLDPLGKWSKTGL
VVYDSSVPIGATPEYLAGHYMLQGASSLLPVMALAPQENERILDMCCAPGGKTSYIAQLM
KNTGVILANDSSAERLRSVVGNLHRLGVTNAVLSHCDGRQFPKVLGGFDRVLLDAPCSGT
GVISKDPAVKTNKDERDILRCAHLQKELILSAIDSVNAASETGGYIVYCTCSIMVEENEW
VVDYALKKRNVRLVPTGLDFGKEGFTRFKDRRFHPSLKSTRRFYPHTHNMDGFFIAKLKK
FSNAIPKMQKDEESTVETASLASAPEVAAEPQLKRKKLERLKVTVGQKKQQQPPSKGGSV
QRHKRPSPRHLGTRPPARKQHRVHRNRQ
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcaaacttgatgtactgaggaaggaaaaacgtggcccagggcgcaaagcccgc
aaacagaagggagcagaggtagaattagccaaatttcttccgccagctactgataacagt
ggaaacaaattatccagccatgcacgaaaaagggctgcaaagagacgaatggggtcagga
aaaacccaagctaggaaaaatctgcttcagctaaagaagccaacagataaagggggaatg
gatggcaccagcacagctgcagagcagccatccccacagaaaggaggaagatccaggggg
ccagcagaaggagcctctcggcaccctcagcttgggtgcagtgacagatgctcactttcg
ctaactccagccaagagatcacagcctgctggggataatgaagaagagcgtttggagtcc
agtgaaagtgagggagatgaggatgtagatgcctgggagaacatgggggatgacgggagc
aatgaggagatggtggatgattatggagcctcgtcctctgaggaagaggagctgctgccc
atcgaacaagccgtccggaagcagaagtctggcagggagggcctcagtgaggatgacagt
gaagatgaagaggagtgggtgagcagccgaagcaaggggcaggaggaagaggaggacacg
gacctgcagctcaatatggagatagatgagcaatttgtgttacccagtggtgaggagatc
gagagagagactgctgagccacctgacctgcacctcgttcatcaacgtatcaaggacaat
gtggaggtgctgcaggacttcagggtgaagcgggaagcaggacgtgcccggcaggagtac
ctcgcattgctacaccaggaccttgctgcctactattcctacagtgacttcttgcttaag
aagctcatggagctcttccctctccctgagctggtcaacttcttagaatctaatgaggtt
cctcgccccatgacgcttcgtaccaacacactgaaaacacggcgacgagacctggcacag
gctctgattaatcgcggtgtgaatcttgaccctctggggaagtggtcgaaaactgggctt
gttgtctacgactcctctgtgcccatcggtgccacccctgagtacctggctggacactac
atgctacaaggagcttccagcctcctccctgtcatggctctggccccccaagagaatgaa
cgcatcctggacatgtgctgtgccccaggaggcaagaccagctacatagctcagctgatg
aagaacacaggtgtgatcctggctaacgacagcagtgctgagcggctgcgcagtgtggtg
gggaatctgcaccgtctgggagtcaccaatgctgtcttgagccactgcgatggacgccaa
ttccccaaggtgctgggtgggtttgaccgtgtcctccttgatgctccctgcagtggcaca
ggtgtcatctccaaggacccagctgtcaaaaccaacaaggatgagagggatatcctgcgt
tgtgctcatctgcagaaggagctgattctcagtgctattgactcagtcaatgctgcctca
gagacagggggctacatagtgtactgtacctgctccatcatggtggaagagaatgaatgg
gttgtggattatgccctgaagaaacgcaatgttcgcttggtgcccacagggctggacttt
ggcaaggaaggattcaccaggttcaaggaccgtcgcttccacccatccctcaaatccaca
cggcgtttctaccctcacacccacaacatggatgggttcttcatcgccaagctcaagaaa
ttttctaatgccatccctaaaatgcagaaagatgaggaatctactgtggaaacagcaagt
ttagcatctgctccggaagtagctgcagagccacagcttaaaaggaagaaacttgagagg
ttgaaagtcaccgtggggcagaagaagcagcagcagcccccttcaaagggaggttctgtg
caaaggcataagaggccctctccccggcatctaggaactcggccacctgccaggaagcag
catagagtgcaccggaatagacaataa
DBGET
integrated database retrieval system
