Trachemys scripta elegans (red-eared slider): 117885970
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Entry
117885970 CDS
T07347
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tst03041
]
117885970 (RBM39)
Spliceosome [BR:
tst03041
]
Common components
Common spliceosomal components
General mRNP proteins
117885970 (RBM39)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
IHO1
Motif
Other DBs
NCBI-GeneID:
117885970
NCBI-ProteinID:
XP_034643460
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All DBs
Position
12:31795497..31844474
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AA seq
522 aa
AA seq
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MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRERRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLTQQNEVLAAAASVQPLATQCFQL
SNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAV
NALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPVRR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgatattgatattgaagcaatgcttgaggctccttacaagaaggatgagaac
aaattgagcagtgccaatggccatgaagagcgcagcaagaagagaaaaaaaagcaagagc
agaagtcgcagtcatgagaggaagaggagcaaaagtaaagagcgcaaacgaagccgtgat
cgcgagaggaaaaagagcaaaagtcgggaaaggaaacgcagcagaagcaaagaacgcaga
cgtagccgctctagaagtagagaacgtagattcagaggccgctatagaagcccatattct
ggtccaaaattcaacagtgctatcagagggaagattggtctgcctcacagcatcaaatta
agcagacggcgctccagaagcaaaagtccattcagaaaagacaagagccctgttagagag
ccaattgataatttgacccctgaagagagagatgctcgaacagtgttctgtatgcagttg
gctgcaagaattcggccaagagacttggaagaatttttctctactgtaggaaaggttcgt
gatgtgcggatgatctctgatagaaattcaagacgttccaagggaattgcttatgtagaa
tttgttgatgttagttcagtgcctctggcaataggactaactggacagcgtgttctggga
gtaccaatcatagtacaagcatcgcaagcagagaaaaacagagcagcagcaatggccaat
aacctacagaaaggcagtgctgggcccatgagattgtatgtagggtcattacacttcaac
ataactgaagatatgcttcgtgggatctttgaaccatttggtcggattgaaagcattcag
ctgatgatggatagtgaaactggacgctccaaaggatatggatttattacgttctcagat
tcagagtgtgccaaaaaagccttggaacaactaaatggatttgagctagctggcaggcca
atgaaagtaggtcatgtaacagaacgcactgatgcttccagtgctagttcatttttggac
agtgatgaactggaaaggactggaattgacttgggaacaactggtcgtctacagttgatg
gcaagacttgcagagggtactggtttgcagattcccccagctgcacaacaggctctgcag
atgagtggatctttagcatttggtgctgtggcagatttgcaaaccagacttacccagcag
aatgaagttctggctgcagctgcttctgtacaaccacttgcaacacagtgcttccagctt
tccaatatgtttaaccctcaaactgaagaagaagctggttgggatacagaaattaaggat
gatgttattgaggaatgtaacaaacatggaggagttatccacatttatgtagacaaaaat
tcagctcagggcaatgtgtacgtcaaatgcccttcaatcgctgctgccattgcagctgtc
aatgcattgcatggaaggtggtttgcaggtaaaatgattacggcagcatatgtacctctt
ccaacataccacaatcttttccctgattccatgactgcaacccaactactggttcctgtt
cgacgatga
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