Trachemys scripta elegans (red-eared slider): 117885988
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Entry
117885988 CDS
T07347
Name
(RefSeq) tripartite motif-containing protein 54-like
KO
K10654
tripartite motif-containing protein 55
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117885988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117885988
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117885988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
Sina_RING
Motif
Other DBs
NCBI-GeneID:
117885988
NCBI-ProteinID:
XP_034643485
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All DBs
Position
12:4274682..4289824
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AA seq
582 aa
AA seq
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MSIQMEYNSYRRDHPIDSLERQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQVSNPT
SPSSRGTTLGSAGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESARPLLKTEH
PSCEEHEEEKINIYCMTCGVPTCSLCKVFGEHKECEVAPLSDIYMKQKSALTDGIGALVA
TNDRIQVFIDNLQGTCKNIEDNGKAQKQALCEKFDRMYAILEERRKIMLQRITYEQEEKT
QHLKSLTRSYSEHTESSSKLVDAALQSMEELQMAVFVQNSKVLIQKISEVTQSCEVEALE
SGYDNMEHYAVDFNAEERVLYQLDFIKVDESEEGAEEGEEDAVWGDAEGAAAEFVAEGQV
ANSEGREEPLNVPADGKEEEAEGKALMLKEAESETAGETDAVAKLPGSSQAAESDVPAGK
EGVEREPGTAQQKDAAGSDGAAVSCILGDAQGSGTEAAVSSNALPMIAPNLALQNNPTGN
ALDTPAESAAQGRGATETEEATCFVPEEATCFVPAETFSTSDSSAESKKEVDPSNCGASP
AKGSAEGGLAVASGCSQDPSVVDGKSEETSETPFGSNFNPAL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatccaaatggaatacaactcctatcggagggatcaccccatcgacagcctggag
aggcagctcatctgccctatttgcttggagatgttcaccaaacctgtggtaatcctgcct
tgtcagcacaacctgtgccggaaatgtgccaatgacatatttcaggtgagtaatcccact
tctccctcttctcgtgggacaaccttgggctccgcaggccgctttcgctgcccatcctgt
cgccatgaggtggtgctggacaggcacggtgtctatggcctgcagaggaatctactcgtg
gagaacatcattgatatttacaaacaggagtcagcgagacctctgttaaagacagaacac
ccaagctgcgaagagcatgaggaagaaaagatcaacatctactgcatgacgtgtggggtg
cccacctgctccctctgcaaggtcttcggggagcacaaggagtgtgaagtagctcccctg
tcggacatctacatgaaacagaagtctgcgctgacagatgggattggagcccttgtggcc
accaatgacagaatccaggtcttcatcgataacttgcaaggcacatgcaagaacatcgag
gacaacggcaaggcccagaagcaggctctgtgtgagaagtttgaccgcatgtatgccatc
ttggaggagaggaggaagattatgctgcagaggatcacttatgaacaggaggagaagacc
cagcacctgaagtccctcaccaggtcgtacagtgaacacactgagtcatcctccaagctg
gtggatgcagcgttgcagtccatggaggagctgcagatggccgtctttgtgcagaattcc
aaagttctcatacagaaaatttctgaggtgacccagagctgtgaagtggaggcgctggag
tctggttatgacaatatggagcactatgctgtggatttcaatgccgaggagcgggtgctg
tatcagttggacttcattaaagttgatgagtctgaagaaggggcagaggaaggagaggaa
gatgcggtgtggggggatgctgaaggtgcagcagcagagtttgtggcagaagggcaagtg
gccaacagtgagggcagagaggagcccctgaacgtccctgcggatggaaaggaagaggag
gccgaaggaaaagccctgatgttaaaggaagctgagagtgaaactgctggggaaactgat
gctgtggctaaactaccaggttcatctcaagctgcggagtcggatgtcccagctggcaaa
gagggagtggagagagagccgggcactgcccagcagaaggatgcagctggttcagatggg
gctgctgtatcatgcatcctgggagatgctcaggggtccgggacagaagctgccgtgtct
agcaacgccttgccaatgatcgccccaaatcttgccctccaaaataaccccacgggaaat
gcccttgacaccccagctgaatccgcagcccagggcaggggagctactgagacagaagaa
gccacttgctttgtcccagaagaagccacttgctttgtcccagccgagacattcagcacc
tcggacagctcagccgagagcaagaaggaggttgacccaagcaactgcggtgccagtccc
gccaaaggcagcgcggaggggggactagctgtggcatctggctgcagccaggacccctct
gtggtggatgggaagagtgaagaaaccagtgaaactccatttgggagtaacttcaatcct
gctctgtga
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