Trachemys scripta elegans (red-eared slider): 117886165
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Entry
117886165 CDS
T07347
Symbol
CHRNA4
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-4 isoform X1
KO
K04806
nicotinic acetylcholine receptor alpha-4
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04080
Neuroactive ligand-receptor interaction
tst04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117886165 (CHRNA4)
04082 Neuroactive ligand signaling
117886165 (CHRNA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tst04040
]
117886165 (CHRNA4)
Ion channels [BR:
tst04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117886165 (CHRNA4)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
117886165
NCBI-ProteinID:
XP_034643706
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All DBs
Position
12:5817331..5854361
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AA seq
624 aa
AA seq
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MGFLVSKENLLLFLCANVFPVCSHVETRAHAEERLLKKLFSGYNKWSRPVANISDVVLVH
FGLSIAQLIDVDEKNQMMTTNMWVKQEWYDYKLRWDPLEYENVTSIRIPSELIWRPDIVL
YNNADGDFAVTHLTKAHLFYDGRIKWMPPAIYKSSCSIDVTFFPFDQQNCTMKFGSWTYD
KAKIDLVSMHSHVDQLDYWESGEWVIIDAVGNYNIKKYECCAEIYPDITYFFIIRRLPLF
YTINLIIPCLLISFLTVLVFYLPSECGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPL
IGEYLLFTMIFVTLSIIITVFVLNVHHRSPRTHTMPDWVKRIFLDVVPRLLFMQRPSVVK
DNCKKLIESMHKIASSPQLWSETEVEPKFTTSSSNSPQSKEPSPTSSFCAHLEEQVKPQT
VGKSPSLQYSVLHQEPAQASCSSLQPPCHPLSDTQPTSISKSRSLSVQQMYSPNKVEDGN
IRCRSRSIQYCYLQEESSQTNGQTSGSPAAQRYRLNEKQPQSKASQCKCKCKKNAATSSS
EQGTKTLSTKEPHVLLMSPALKLAVEGVHYIADHLRAEDADFSVKEDWKYVAMVIDRIFL
WMFIIVCLLGTVGLFLPPWLAGMI
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgggatttctagtttctaaagaaaaccttctcctcttcctttgcgctaacgtcttccct
gtgtgcagccatgtggaaacccgagcccacgcagaggagagactcctgaagaaactcttc
tctggctataacaagtggtcccgacctgtagccaacatttcggacgtggtcctcgtccat
ttcggattgtccatcgcgcagctcattgacgtggatgagaagaatcaaatgatgaccacg
aacatgtgggtgaagcaggagtggtatgactacaagttgcgctgggatcctctggaatat
gagaacgttacatccatccgcatcccttcagaactcatttggaggccggatattgttctc
tacaacaatgcagatggggactttgcagtcactcacctgaccaaagcccaccttttttat
gatggaagaatcaagtggatgccccctgctatctacaaaagctcctgtagtattgatgtc
accttcttcccatttgaccagcaaaactgcaccatgaagtttggctcctggacgtatgac
aaagccaagatagacttagtgagcatgcacagccatgtggaccaattggactactgggag
agtggagaatgggtcatcatcgatgccgtgggcaattacaatatcaagaaatatgagtgc
tgtgcagagatctaccctgatatcacctacttctttattatcaggaggctgcccttgttc
tacacaattaatctgatcatcccctgcctccttatctccttcctgactgtcttagtcttc
tacctgccttcggagtgtggtgagaagatcaccctttgtatctcagtgctgctgtcactg
accgtgttcctgctgctcattacggagatcatcccttccacctccttggtcatccccttg
attggagagtatctgcttttcaccatgatatttgtcaccttgtccatcatcatcactgtc
tttgtgctcaacgtgcaccaccgctccccccggacccacaccatgcccgactgggtgaag
cggatctttctcgacgttgtcccacgcctcctcttcatgcaacggccctcggtggtgaag
gacaattgcaagaagctgattgagtccatgcacaaaatagcctcctctccacagctttgg
tccgagaccgaagtggagcctaagtttactacctcctcttcaaacagccctcagagcaaa
gaaccatcacccacctcttccttctgtgcccatcttgaggagcaagtcaaaccccagact
gtcggcaagtcaccttctctccagtactctgtgctacaccaagagccagcacaggctagc
tgctcctccctgcagcccccctgccatccgctgagtgacacccagcccacgtccatctcc
aagagcagatcattaagtgtccagcagatgtacagcccaaataaagtagaggatgggaac
atccgctgcagatccaggagcatccagtactgctacctgcaagaggagtcctcccagacc
aacggccagaccagtggctctccggcagctcagcggtaccgtctaaacgagaagcagccc
caaagcaaagcctcccagtgtaaatgcaagtgtaaaaagaatgcggcaaccagctcttcg
gagcaaggaaccaaaactctcagcaccaaagagccacacgttttgctgatgtcccctgcc
ttgaagctggcagtggagggggtccattacatcgcagaccacttgagagccgaggatgcg
gatttctcagtgaaggaagactggaagtacgttgcaatggtgatcgacagaatcttcctt
tggatgttcatcatagtctgcttactgggcaccgttggtctcttccttcccccttggctg
gcagggatgatctaa
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