Trachemys scripta elegans (red-eared slider): 117886280
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Entry
117886280 CDS
T07347
Symbol
ZBP1
Name
(RefSeq) Z-DNA-binding protein 1
KO
K12965
Z-DNA binding protein 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04217
Necroptosis
tst04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
117886280 (ZBP1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
117886280 (ZBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117886280 (ZBP1)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
117886280 (ZBP1)
mRNA cycle factors
Stress granule specific factors
117886280 (ZBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
z-alpha
FaeA
TrmB
RHIM
GMT-wHTH
BLACT_WH
Methyltransf_4
Motif
Other DBs
NCBI-GeneID:
117886280
NCBI-ProteinID:
XP_034643850
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All DBs
Position
12:11786613..11805708
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AA seq
438 aa
AA seq
DB search
MAKAPSSAASQVEQLIFDHLRRAATPKKACEIAGACSVTRKEAKKVLYKLQKEGKVEKQS
DDNKWLVRADAEVECHQKTAELKIDDTALVPLHQPVNAVTPVKDDRKLSENQEKIYQFLS
ENGSRSALAIAKHMGKTTRKDVNADLYALQKRHVLSQEEDTKLWSVYGQGAGYKLTNPGA
NKEAGPVIIQNNPTNIIYQGGVQNTISIADSRATQIGNYNSLNLVDKKDDSRPTVPRLRA
ASENADMLHCEAEAKATPQGGQEIDVTESTLKNTVIGDDNQMNIIMKAFADSREEQLDQY
GTPEKNPFGDSFSASPGPSLKINTSLPGEGRAPLQRVTIDKSEMENVMIGNNNQMSVHEQ
CGSAGLADEETNEEDDASASNLISEQSEWTSCDDSSLDRSSDISILCEKLQDVIIGNNNY
MNVEETANTESGEEDEDK
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcaccgtctagtgcagcgtcacaagtggagcaactcatctttgaccactta
aggagagctgccactccaaagaaggcctgtgagattgccggtgcatgttcagttaccaga
aaggaagccaagaaagtgctgtacaagttgcagaaggagggaaaggttgagaagcagagt
gacgataacaaatggcttgtccgtgcagacgcagaggtggaatgtcatcagaaaaccgcc
gagttgaaaatcgatgacaccgccttagtcccactgcaccagcctgtgaacgctgtgact
cctgtgaaagatgaccgcaaactgtcagaaaatcaggaaaagatttaccagtttctgtca
gaaaatggatctcgcagtgcattagccattgccaaacatatgggaaagacgacacgaaag
gatgtcaatgcagatttatacgcgctgcagaaaagacatgtcctcagccaggaggaagac
acgaagctttggtcggtttacggacagggggcaggttacaagctaacaaatcctggagca
aataaggaagcagggccagttattattcagaataatccaacaaacattatctatcaggga
ggagtgcaaaacaccatctctatagctgattccagagctactcaaattggaaactacaac
tcgctgaatctagtggataaaaaagatgattctagaccaactgttccaagacttagggct
gcatcagagaatgctgatatgttgcactgtgaagcagaagctaaagcaaccccccagggt
ggtcaggaaattgatgtcactgagtccacactcaagaatactgtcattggtgatgataat
caaatgaatatcattatgaaggccttcgctgatagtcgagaggagcagctggaccaatat
ggcactccagaaaagaatccatttggtgacagtttttctgccagccctgggccgtcactg
aaaattaacacctccctccccggggaagggagagctccattgcaaagagtcaccattgac
aagtccgagatggagaacgtcatgatcggaaacaacaaccaaatgagtgttcatgagcaa
tgtggttctgccggcctcgcagatgaggagacaaatgaggaagacgatgcttcagcttcc
aacttgatatcggagcaaagcgaatggacatcctgtgatgatagcagcctggatcggtca
agtgacatttccatcctttgtgaaaagttgcaagatgtaatcattgggaacaacaactat
atgaatgtagaagaaactgcaaatactgagagtggtgaagaagatgaagacaaataa
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