Trachemys scripta elegans (red-eared slider): 117886327
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Entry
117886327 CDS
T07347
Name
(RefSeq) interferon regulatory factor 4-like
KO
K09445
interferon regulatory factor 4
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117886327
Transcription factors [BR:
tst03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
117886327
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Gene cluster
GFIT
Motif
Pfam:
IRF
IRF-3
Motif
Other DBs
NCBI-GeneID:
117886327
NCBI-ProteinID:
XP_034643926
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All DBs
Position
12:2319297..2324985
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AA seq
351 aa
AA seq
DB search
MAETGSHMRLKEWLIAQIDSGRYPGLRWENREKTIFRIPWKHAAKQDYRQQQDAALFKAW
AVYKGKYQEGTKADPSTWKTRLRCALNKSTDFQEVPERSQLDISEPYKVYQILSDGARDP
EKEGSLESPPPEEQQASQPPAPGDPERGVTCGPDKASVSSGLEEDGKKDLMETSQTSPIP
LVSHLPSHPADWGYQVKGVFCGWSPTHARFLQSPQPGDPSSNHVPTADINNSDCWLHVRL
YYRDVLVKEFTTRTAEGCRITYRLVPADNERLYGPSSMEQIQFPSPRLLTGDSRMAGVTG
VLERLLPHLDRGVLLWVAPEGVFMKRQCQGRVYWNGPMAPHNDRPNKLERE
NT seq
1054 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaccgggagccacatgcggctcaaggaatggctcatcgcccagatcgacagc
ggcaggtacccggggctgcgctgggagaaccgcgagaaaaccatcttccgcatcccctgg
aaacacgccgccaagcaggactatcggcagcagcaggacgcggcgctcttcaaggcctgg
gctgtctacaaagggaaataccaggaaggaacaaaggcagacccctccacctggaaaacc
cgtctccggtgcgccttgaacaaaagcaccgatttccaggaggtccccgaaagaagccag
ctggacatctccgagccgtacaaagtgtaccagatcctgtcggatggagccagagacccc
gagaaggaaggcagcctggagtcccctccccctgaagaacagcaggcgagccagccccca
gcccccggggacccggagaggggagttacctgcgggccagacaaggctagcgtgtcctcg
ggtttggaagaggatgggaagaaggatctgatggagacctcccagacttctccaatccct
ctggtctcccacttaccaagtcatccggcagactgggggtatcaggtgaaaggggttttc
tgtggctggagcccaacacatgctcgctttctgcagagcccgcagccgggtgatcccagc
tccaatcacgtccccactgcagacatcaacaactcagattgctggctgcacgtccgcctc
tactaccgcgacgtgctggtgaaggagttcaccacccgcaccgccgagggctgccgcatc
acctaccgcctggtgccggctgacaacgagcgactctacggcccgtcctccatggagcag
atccagttcccctccccccgcctgctgaccggcgacagcaggatggcgggcgtgacgggc
gtcttggaacggcttcttccccacctggaccggggcgtcctcttgtgggtggcccctgaa
ggcgtcttcatgaagcggcagtgccaaggcagggtgtactggaacgggcccatggcgcct
cacaacgaccggcccaacaagctggagagagaga
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