Trachemys scripta elegans (red-eared slider): 117886456
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Entry
117886456 CDS
T07347
Symbol
CARMIL2
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 2
KO
K20493
leucine-rich repeat-containing protein 16
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117886456 (CARMIL2)
Membrane trafficking [BR:
tst04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
117886456 (CARMIL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Motif
Other DBs
NCBI-GeneID:
117886456
NCBI-ProteinID:
XP_034644159
LinkDB
All DBs
Position
13:complement(38989527..39122532)
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AA seq
1485 aa
AA seq
DB search
MALSPGGIPCHLQDSITALLGSKEIILVKPVQLQVKSKYEDDILVLTPWRAYVLQVLLPG
RVWSSFSFLEVREIRIQEPSLVVIDTDTASYAFRLVSLDDLEQVVSHIIMSLKKVFPDSF
PGKLLKNYPPSLFERIQRITDSLKEMLQNNQGPCGGFSETYAALCDYNGFTFREEIQWDV
DNIYHSQDCREFNLLDFAHLESRDVALSITALSFNLWFTKLYCKDFRLNLEISEQLLYML
SKSVKLEELVLENSGLKFEFAQRMAQALRGNPDSALSTISLAGNQLEDKGITAFSQHIEK
RTKGLRSLNLSRTSLTAKGVSTLCQSLASNGIFSTSLQHLDLSGNPGVLATDDASSLHSF
LSHANSVSHLNLAGTDCALDALFGALAIGCCANLAHLDLSKNVYSHKKPRDVPPAIKLFF
SKAAALRYVGLACTKLPPEAVRALLQGLASNSQISDLHLDLSSCELRSAGAQVIQDLIFD
ANAISSLDLADNGFDADMVTLVLAIGRSKSIRHVSLGKNFNIKSKDNLADVLHRIVQLTQ
EDDCPLQSLSVAESRLKLGTNVLLNALGSNTSLSTLDISGNTIGDTGAKMLAKALQINTK
LRTVIWDRNNTTAHGFLDVARALERNYTLRSMPLPMSDVTQAYRSNPEKTEEAVHKMQSF
LARNQMRRTLPKQTFRLQQGIVTSSSEQMVNEMCTSLQKHVDALSACLGREVEASVLCAE
EAIREANLSISLLPLLYETGNAPYQNCQLQHKLECLTEAASQACSREIQAIMQAVLDTTQ
NLCPTILQKSGVRDRLVHTISERIILQDRLHLSTVLDQLITDVFSKLTEIRLSVIAAVAD
GLIDEVLEDLTSAQCRLAENLPKQTPDLHVLQPDNPEEEDFLLRKSRNLLDVAEQSFAAE
EYKMALRRKNKHFRSIRPTPAMRSRSELDLQAEAEDKEIGTHQALLSVSCASLKSRPAST
KDAETGSSLLPFPEPAPTQSLMDLPTEGEKLEHYTRARPRPHRRNKQPPSKPHVQPAPSE
NDEDRSITCVDEGLEEFFTKKLIQEEPPPAPRGISPGSAPLAPSGTRTFKKKIGNFFALK
KPKSSRGWKCEKEPEGRKSTRSDISKPPSKAGEPGKALSKSEEGGLAVEPRANAEPSQTP
DAAHRVRPKYSREGKSQSLILLCGEDEEALGVKHEKRRHLEKSDGEIPSSFEQRVHVMLH
RIGVTKVLSSDGKKKQSKEGEIKKAGSDGDIMDSSAGSPPLVLKSRTHSMSTDPSARSSP
ADTAGRAAAEPSRGPSDVRLSWKALGKQLNAELKGKCSELHSSPRRSFVVQEQSSPTEQQ
VRESWSSSLPRTGRITPAPAPRRISNAGASRDSVDAIAADNCLKPKPRLKNVATRRAISV
HEEQLREQGCTAALESVKIPLRLQRSPVLKRKPKPSSMVDVAGSSTPSAPAALQDTLPQD
EHRATAELQGEQPQAVEQPVENAQNSRTPKSSSSRPASSPPGTMS
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atggctctttccccaggagggatcccatgccacctgcaagacagcatcaccgccttgctg
gggtcaaaggaaatcatcctggtgaagcctgtccagctgcaggtcaaatccaagtatgaa
gatgacatcttggttttaaccccctggagggcgtatgtgctgcaggtgctgctcccgggc
agggtgtggagcagcttcagcttcctggaggtgagagagatcaggatccaggagcccagc
ctggttgtcatagatacagatacagcctcttacgccttccggctcgtgtcactggacgac
ttggagcaggtggtcagccatatcatcatgtcgcttaagaaggtctttccagactctttc
cccggaaaactgctcaaaaactatccccccagtttgttcgagagaattcaaagaataaca
gactccctgaaggaaatgctgcagaataaccaaggaccgtgtggtgggttttcagagaca
tatgctgctttatgtgactacaacggcttcaccttcagagaggagatccagtgggatgtg
gacaatatctaccacagccaagactgccgagagttcaacctgttggacttcgctcaccta
gagagcagagacgtagcccttagcatcacggcgctgtcgtttaacctgtggttcacaaag
ctgtactgtaaggacttcaggctgaatctggagatttctgaacagcttctgtacatgctc
agcaaatcggtgaaactggaggagctggtgctggaaaacagcgggttaaaatttgaattt
gcccagaggatggcccaggcgttaagaggaaacccggactcggctctaagcaccatcagc
ctggctggcaaccagctggaggacaaagggataactgcattcagccagcacatcgagaaa
cgcaccaagggcctgcgtagcctgaacctctctaggacctcgctgaccgccaaaggagtg
agcactttatgccaatcccttgcatctaatggaatcttcagcacctcacttcagcacctg
gatctctcggggaatcctggcgtccttgccacggacgatgccagcagcttgcacagcttc
ctcagccacgcaaactcggtgtctcaccttaatctggccggcacagactgtgctttggat
gcactgttcggcgcattggccatcggatgctgtgccaacctcgcccacctggatctctcc
aaaaatgtgtactcgcacaaaaagccgagagatgtccctccggccatcaaactgttcttc
agcaaggcagctgccctccgatacgtcggcctggcgtgtaccaagctgccgccagaggcc
gtaagggccttgctgcaggggttagcgtctaactctcagatcagtgacctgcacctggac
ctcagtagctgcgagttgagatcggcaggtgcccaggtgatccaagatctgatttttgat
gccaatgcaattagcagtttggatttagcagacaatggctttgatgctgacatggtcacg
ttggtgctggcgattggccgaagcaaatccattaggcatgtctccttaggaaagaatttt
aacatcaaatccaaggacaatctggccgacgttctccaccggattgttcagctcacgcag
gaagatgactgtcctcttcaatccctgtccgtggccgaatcgcgactgaaattgggaacc
aatgtcctcctgaacgccctgggcagtaacaccagcctcagcacactggacatcagcggg
aacaccattggcgacactggagccaagatgctggccaaagccttgcagatcaacacaaaa
ctcaggacagtaatttgggacagaaacaacaccacggcccatggattccttgatgttgcc
cgtgctttggaaaggaattacaccctgcggtccatgccattgccaatgagcgacgtgact
caggcttatcggagcaatccggagaagacggaggaggctgtccacaagatgcagtctttc
ctggcgaggaatcagatgcggcggacgctgcctaagcaaaccttccggctgcagcaggga
atcgtcaccagctcctcggaacagatggtgaatgagatgtgcacgagcctacagaagcat
gttgacgccctgagtgcctgtctgggccgagaggtggaagccagtgtcctctgtgcagaa
gaagccattcgggaagcaaacctgtccatcagccttttgccgctcctatacgagacgggg
aacgccccataccagaactgccagctgcagcacaagctggaatgcctcactgaagcagcc
tcgcaggcctgcagccgggagatccaggctattatgcaggccgtgctggataccacccag
aatctgtgtcctacaattctgcagaagagtggcgttcgggaccggctggtccacacaatc
tctgagcgaatcatccttcaggatcgcctccacctgagcaccgtcttggaccagctgatc
accgatgtgttcagcaagctaaccgaaatcaggctgtctgtcattgcggccgtggccgac
gggctgatcgacgaggtgctggaggacctgacaagtgctcagtgcaggctggcagaaaat
ctccccaagcaaactccggatcttcatgtgctacagccagacaatcctgaggaggaggat
tttctgctaaggaagagcaggaatctgctggatgtcgctgagcaaagctttgcggctgag
gagtataagatggctctgaggaggaaaaacaagcacttcaggagcatccggcccacgcct
gccatgagaagtcggtcggagctcgatcttcaggcagaggcagaagataaggagattgga
actcaccaggctctgctgtcagtcagctgtgcctctctgaagtcacgccctgcctccaca
aaggatgctgagactggaagcagtttgcttcctttcccagagcctgcacccacacaatcc
cttatggacctgccaactgagggagagaaactggagcactacacccgagctaggccccga
ccccaccgcaggaacaagcagcctccaagcaagccccatgtccagcccgccccgtctgag
aatgacgaggacagaagcattacttgcgtggatgaagggctagaggagttctttacgaag
aagctgatccaagaggaaccgcccccagccccccgggggatctctcctggctcagccccc
ctcgcgccgtctggcacccggactttcaaaaagaaaatagggaacttctttgcattgaag
aagccgaagtccagcaggggctggaagtgcgagaaggagccagagggcaggaagtccacg
cgcagtgacatttcaaagcctcccagtaaggcaggggagcctgggaaggcgctgagcaaa
tccgaagagggtgggcttgccgtggagcccagggccaatgcagagcccagccagaccccc
gatgccgcccacagggtcaggcccaagtactcccgagagggcaagtcacagtcactcata
ctcctgtgtggcgaggacgaagaggccttaggagtgaaacatgaaaagaggcggcacttg
gagaagagcgacggggagatccccagctccttcgagcagcgcgtccatgtgatgctgcac
cggatcggggtcaccaaagtcctgtcgtccgatgggaagaagaagcagagtaaagaagga
gagatcaaaaaagctggttcagatggagacatcatggacagctcggcaggctcccctccc
ctcgtcttgaaatctcgcacacactccatgtccacagacccgtctgcgcgaagcagccct
gccgacacagcgggccgagctgcagccgagcccagccgcgggcccagcgacgtgcggctc
tcctggaaggccctggggaagcagctgaatgccgagctcaagggcaagtgttctgaactc
cattcttcccccaggcgctcctttgtcgttcaagagcagagcagccccacggagcagcag
gtccgagagagctggagcagcagcttgcccaggaccgggaggatcacgcctgcccctgcc
ccaaggagaattagcaacgcaggagctagcagggacagcgtcgatgcaatcgctgcagac
aattgcctgaaacccaagcctcgtttgaaaaatgtggccaccaggcgtgccatttccgtt
cacgaagaacagctcagggagcagggctgcacggccgctctggagagtgtaaaaatcccc
ctgcgcctgcagcgctcgccagtcctgaaacggaaacctaagcccagctccatggtggat
gtggcggggagcagcacgcccagtgccccggcagcattgcaggacactctgccacaggac
gagcacagggccacagccgaactgcagggggagcaaccgcaagccgtggaacaaccggtt
gaaaatgcacagaacagccgtacaccaaagagcagcagctccaggcctgccagcagcccc
ccagggacaatgagttag
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