Trachemys scripta elegans (red-eared slider): 117886464
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Entry
117886464 CDS
T07347
Symbol
VPS35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117886464 (VPS35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117886464 (VPS35)
Membrane trafficking [BR:
tst04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
117886464 (VPS35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
KH_GLD-3_1st
Imm5
ADIP
Motif
Other DBs
NCBI-GeneID:
117886464
NCBI-ProteinID:
XP_034644185
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All DBs
Position
13:complement(25500700..25541609)
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AA seq
796 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEQTDEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLPGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTVIVSQEQVDAIMNLVSTLIQDQPDQPAEDPD
PEDFADEQSLVGRFIHLLHSDDPDQQYLILNTARKHFGAGGNQRIRFTLAPLVFAAYQLA
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQCRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESTEETEQINKHFHNTLEHLRLR
RESPESEGPIYEGLVL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgccaacaacacagcagtctcctcaagatgagcaggaaaagctcctggatgaagccata
caggctgtaaaagtccagtctttccagatgaagcgatgcttggacaaaaacaagcttatg
gatgctctgaaacatgcctccaacatgcttggtgagctgcggacttctatgctatctcca
aagagctattatgaactctatatggctatttctgatgagctacactatttggaggtatat
ctgacagatgaatttgccaagggaaggaaagtggcggatctttatgaactagtacagtat
gctggcaatattatcccgagactctatctgctgataacagtaggtgttgtctatgtcaaa
tcctttcctcagtccagaaaagatatcctgaaagatttggtggaaatgtgccgcggtgtc
cagcatcctctaagaggcttgtttcttcgaaactaccttcttcaatgtaccaggaatatc
ttaccagacgaaggcgaacagacagatgaagaaaccactggcgacatcagtgattccatg
gattttgtgttgctgaactttgctgagatgaacaaactctgggtgcgaatgcaacaccaa
ggacacagtcgagatagagaaaagagggagcgggaaaggcaggaactgagaatcctagtg
ggaacaaacttggttcgccttagtcagttggaaggcgttaatgtggagagatataaacag
attgttttgcctggaatattggagcaagtagtaaactgcagggatgctctagctcaggag
tatctcatggaatgtattattcaggttttcccagacgaatttcatctccagacccttaac
ccttttctccgagcctgtgcggaattacaccaaaatgtgaatgtgaaaaacattatcatt
gctttaattgacaggttagctttatttgctcaccgtgaagatggaccagggatcccagca
gatattaagctttttgacatcttttcacagcaggtggccactgttatacagtctagacaa
gatatgccttcagaggacgtggtgtcattgcaagtctcgcttattaacctagctatgaaa
tgctatccagatcgtgttgactacgttgataaagtgttagagacaactgtggaaattttt
aataaacttaatctggagcacattgcaacaagcagtgctgtttcgaaagagctaacacga
cttttaaagatcccggttgatacctacaacaatatcctgacagttctgaaactaaagcac
ttccatccgctctttgagtactttgactatgagtccagaaagagtatgagttgttacgtg
cttagcaatgtactggattataatacagtaattgtctcccaagaacaggttgatgcaatt
atgaatttggtatcaacactgatccaggaccaaccagatcagcctgccgaagaccctgac
cctgaggactttgctgatgagcagagccttgtgggaagatttattcatcttctacattca
gatgaccctgatcaacagtatctgattttaaacactgcccggaaacactttggcgcaggt
ggaaaccaacgtattcgtttcacactggcacccttggtttttgctgcataccagcttgcc
tttcgctacaaggagaattctaaagtggatgacaaatgggaaaagaaatgccagaagatc
ttctcttttgcacatcagaccatcagtgctttaatcaaagcagaattggcagagctgcct
ctgcggctttttctccaaggagcactggctgctggagaaattggttttgaaaaccacgaa
acggtggcctatgaattcatgtcccaggcattctctctgtatgaagatgaaatcagtgat
tcaaaagcacagctggctgcaatcaccttgataattggaacatttgaaaggatgaaatgc
ttcagtgaggagaaccatgagcctttgaggactcagtgtgcactggcagcttcaaagctg
cttaagaagccagaccagtgccgggctgtaagcacttgtgcccacctgttctggtctggc
agaaacactgacaaaaatggagaggagcttcatggaggaaagagagtaatggaatgcttg
aaaaaggctctaaagatagcaaatcagtgcatggatccttcactccaagttcagcttttt
atagaaattctgaacagatacatctatttttacgaaaaggaaaatgatgcggtgacaatt
caggttttgaatcagctcatacaaaagatacgagaagaccttccaaaccttgaatctact
gaagaaacggaacaaattaacaaacattttcataacacactggagcacctgcgtttgagg
agggaatcaccagaatctgaagggccaatttacgaaggtcttgtcctttaa
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integrated database retrieval system
