KEGG   Trachemys scripta elegans (red-eared slider): 117886481
Entry
117886481         CDS       T07347                                 
Symbol
POLQ
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase theta
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
tst  Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:tst00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tst03400]
    117886481 (POLQ)
Enzymes [BR:tst01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     117886481 (POLQ)
DNA repair and recombination proteins [BR:tst03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    117886481 (POLQ)
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII Helicase_dom4_arc DUF4332 HHH_5
Other DBs
NCBI-GeneID: 117886481
NCBI-ProteinID: XP_034644240
LinkDB
Position
1:143336069..143474157
AA seq 2658 aa
MAEREDGGGLAMGSSSRAGGSRRPRRGGLARSPPAPGGCSHFGSAAPARPVLSPPPGLER
SLGGSGSPSRSGRCQQMNIPDDQADKLLLASWGLPEVVLEKYHSLGVVHMFEWQAECLML
GQVLEGKNLVYSAPTSAGKTLVAELLILKRVLETQKKALFILPFVSVAKEKKYYLQTLFQ
EVGVRVEGYMGSTSPAGRFSALDVAVCTIERANGLINRLIEENKMDSLGMVVVDELHMLG
DSHRGYLLELLLTKVRFVTEKVAKRQTKENSPVFDSVQIVGMSATLPNLGLLASWLNAEL
YNTDFRPVPLMEWVKIGRNIYDSSMKLVREFQPMLQVKGDEDHVVSLCYETIRDGHSVLL
FCPSKNWCEKLADIIAREFYNLQHWSLQQAERFTKTSALSPVALDKEGIEEVMDQLRRSP
SGLDSVLQRTLPWGVAFHHAGLTFDERDIIEGAFRRGLIRVLAATSTLSSGVNLPAHRVI
IRTPVFGGRLLDILTYKQMAGRAGRKGVDIVGESILVCKSSERSKGIALLQGSLKPVHSC
LLRGKGEGVTSSMIRAILEIIVGGVASTPDDVRTYASCTLLAASLKDSDQKSERDEDRAQ
NGAVEACVRWLLENEFIQILDSGNGMKAEVYRPTHLGTATLSSSLSPTEALGIFADLQRA
MKGFVLENDLHILYLVTPVYEEWTTIDWYQFFCLWEKLPSSMKRVAELVGIEEGFLARSV
KGKIIAKTEKQHRQMAIHKRFFTSLALLDLISEVPLKDITKKYNCSRGQLQSLQQSAATY
AGMVTVFSNRLGWHNMEQLLSQFQSRLTFGVQRELCDLVRVSLLNAQYARALYNAGFITV
ADLAKGNTAEVETALKNAVPFKSIRRAVDEDEEAAEERRNTHCIWMVGMKGLTESEAASL
IVEEARILLQQDLAMMGVQWSPDSFLESDTSSMTSSESELEDRKCKLNGECSLGILKVFS
NEGYRILPDKGTNFQAGNSSNIKKGNKRLLSGSMSNPRPQNELQEDHTQTKERNGDVIVY
SARKRPNLGKGKENREVTFLTKSEAGSGETTQEFPTEKGKRPTLTFTSRKTSKASGYRRI
MDTSFRQTEGKSTVSKQHQLLLDESRMHTTDINGPSVSSCSKSKAKSFSDRKNKEFGENE
SSAHKLFTVKGSESFQVDEMQPESKDIMEELLTEPSTTNKTNPKETVNPLEARDTVVSDA
PPKNMEIDDIMRDLGISSRSAKNEYMGVKQGKIQPVTNCAEKIPAKQQMVLGTDLCNDGV
SSSANMHVSTSASKQKTDENKSFHFQIQNDGKTCTEKPNGILLQTGGVGKADNQPEDFLK
DSTVKSRAVCVAKDIKNGYSPDLYSVSKEFEDSFQLDTQTDRILQQQVAAEIARQQGEKD
TERAEIPVQKISMKLHCASTSQNEDVANEKLAAALRKVVCSNLGTRNTTKENTDLHCTNA
LGSGSPNLQPAMKCTESAFCFKGNDFSFTDSQLCSFLQGYQTQNSVKESASQGLQKAVSP
ANAQCPNTVLVQVECHPPPETSLNMSDSLLFDDSFSYVNGPPDMHTDEAEGTESGEQKVV
TPPSKATSSSLADILHQQNLDPIQDILTVNVNWNEHQHPAQCNDVSVIFSDIDSLQIAEA
LGNVDLSPCQGDSLSAALVKLGLRKPRREEDDPRPEGTSLDQGASPQNAQQAVEKNTNPV
VWSDHSFDISPGLQDILDRWPSPSDNKPVVLSPRVSSSKGKLVISNSKQEPGAISEFSYC
QRESLSTCQGLKNYFKVRESNKGTLDVQKPAYNPLLLKGSNRIFDPQPDIRKGLIPPTPP
KEPVPKSFGTSSLTFGKNKNVSHIDEVPPFQPLQNGKPSSDHHIETLPFKPGNGETCEAL
LETNPVKDNSIIDQGFSLQLSQHVLPLISCSAESFTIIDVASDKALFQTFIREWRNNSRF
AISVACERTKCLLSPKSTIGGRFKQVRSPQRIQVKDDGFPIKGCEDILVVGLSVCWGGKD
AYYVSLQQKQDDQTEISASLAPPPLDQNLSVTERLCQVQSCLQKESESAHSLVMYNFIQH
YKTLLLACGISLEGSFEDPKVACWLLDPGSKERTLHNMVTNFLPHELPLLEGMGTGQGVQ
SLGLSANADYSGRYRAAIESVLIFNTMNQLNSLLQKENLTDVFHKVEMPTQYCLALLELN
GIGFSTTECETQKHVMQAKLNEIEAQAYQMAGHSFSLTSPDDIAEVLFLELKLPPNGDMK
IQGNKKTLGYTRRATANGNRVRLGKQFSTTKDVLEKLKALHPLPGLILEWRRITNAMTKV
VFPLQREKRLNPALGMERIYPISQTHTATGRISFMEPNIQNVPKDFEIEMPTVVGESPPS
QARGCGATFPGGRGRKRCSTLPCGLKVLADEGTKERGMPFSVSMRHAFVPFPGGLILAAD
YSQLELRILAHLSRDRRLIEVLNSGADVFKSIAAEWKMIDAEAVGDEIRQQAKQICYGII
YGMGAKSLGEQMGIEENDAACYIESFKSRYPGIQKFLRETVKKCSRDGFVQTILGRRRYL
PAIKDPNPYSKAHAERQAVNTAVQGSAADIVKTATVNIQRRLEAFPSAVKSHGHLESSFQ
SNRAGRLERRRNRGMLQSGGFFILQLHDELLYEVAEDSVIQVAQIVKFEMENAIKLSVKL
NVKVKIGPSWGDLQELEL
NT seq 7977 nt   +upstreamnt  +downstreamnt
atggctgagcgggaagatggcggcgggttggcgatggggtctagttcccgggctggtggc
tccaggaggccaagacggggcggcctggcccgttccccacccgctcccgggggctgcagc
cacttcgggtccgcggcccccgcccggcccgtgctgagccccccgcccggcctggagcga
tccctggggggcagcggcagcccgagccgctcagggcgatgccaacagatgaatattccc
gatgaccaagcagacaagctgctcctagcaagctgggggcttcctgaagtagttctggag
aaataccacagtctgggagtagtacatatgtttgaatggcaagcagagtgcctgatgctt
ggacaagtcctggaggggaagaacctagtttactcagcgcctactagtgctgggaagacg
ctagttgctgagttactcatcttgaagagagtcctggaaacccaaaagaaagctctgttc
atcctcccctttgtctctgtggccaaagagaaaaagtattacctgcagactctgtttcag
gaggtgggtgtgcgggtagaaggctatatgggaagtacttcccctgctggacgtttctct
gcactagatgttgctgtctgcaccattgagagagccaacggactaatcaatagactcata
gaggagaacaagatggactcactggggatggtggttgtggatgagttgcacatgctggga
gattctcacagaggatatctgctggaactcctgctgaccaaagttcgatttgttacagag
aaagttgctaaaagacagacaaaggagaacagtcctgtttttgacagcgtacagatagta
ggcatgagtgccaccctccctaacctgggtcttctggcctcctggctgaatgctgagctc
tacaatactgattttcgccctgtaccccttatggagtgggtgaaaattggccgtaatatt
tatgactcttcaatgaagctcgtgcgggaattccaacccatgctgcaagtgaagggagat
gaagaccatgtggtgagcctgtgttatgagaccattcgcgatggccattcagtcctactc
ttctgtccatccaagaactggtgtgaaaaactggcagacatcatagccagggagttctac
aatctgcaacactggtccctgcagcaggctgagaggtttaccaaaacctcagcactttca
ccagttgccttggacaaggaaggaatagaagaggtgatggaccagctacggcgctcaccg
tccggtctggactctgtgctccagcgtactttaccatggggagtggcatttcatcatgca
ggtcttacttttgatgaacgggatatcattgaaggggcctttcgccgggggttgattcga
gtcctggcagcaacatccaccctttcttctggggtgaatctgcctgcacatcgggtaatt
atccgaacacctgtgtttggtggcagactcctggacatcctaacttacaaacagatggct
gggagggctggcaggaaaggagtggacatagtgggtgagagcattctagtgtgcaagtcc
tctgagagatcgaaaggcattgctctgcttcagggatcactcaagcctgtccacagctgt
ttgctcagaggaaagggggaaggggttacatctagcatgatacgagcgatcctggagatc
atagtgggtggagtggccagcactccagatgatgtgcggacctatgcttcctgcacactc
cttgctgccagtctgaaagacagcgatcagaaaagtgagagagatgaagacagagctcag
aatggagctgttgaggcttgtgtgagatggctgctagagaatgagttcatccagatttta
gactctggcaatggaatgaaagcagaggtctatcgtccaacacatcttggcactgctact
ctttcctcctctctgtcaccaactgaggccctgggaatctttgctgacctccagagagcc
atgaagggttttgtcctggagaatgacctgcatattctctatttggtcactcctgtgtac
gaggagtggaccactattgactggtatcagtttttctgcctgtgggagaagctgccttca
tctatgaagcgagtggctgagctggtgggaattgaagaaggcttcctggctcgctctgta
aagggcaaaatcatcgctaaaacagagaaacagcacaggcaaatggccattcataaaagg
tttttcaccagccttgccctactggatttaatcagtgaggttcccttaaaggatattact
aagaaatataactgtagtcgtggccagcttcagtccttgcaacagtctgctgccacctat
gcagggatggtaacagttttctctaaccgtctgggatggcacaacatggaacagttgctc
tcccagttccagagtcgcctcacctttggtgtccagagggagctgtgtgacctggttcgg
gtatctctgctgaatgcgcagtatgccagagctctttataatgctggcttcatcacagtg
gctgatcttgctaaaggaaatactgctgaagtggaaactgccctgaagaatgctgtacca
ttcaaaagcattcgtagggcagtggatgaagatgaagaggcagctgaggagcgtcggaat
acccactgtatctggatggtgggaatgaaaggcttaaccgaaagtgaagcagcatccctt
attgtggaggaagctagaatactcctacaacaggacttggctatgatgggagtgcagtgg
agcccagattcttttcttgagtctgatacatcttccatgaccagcagtgaatcagagctg
gaggacagaaaatgtaaactgaatggggaatgttcactagggattttaaaagtattcagc
aatgaagggtacagaattctacctgataaaggcaccaattttcaagctgggaattcatca
aatattaaaaagggaaataaaaggctgttaagtggaagtatgtcaaaccccagaccccaa
aatgaattgcaggaagatcacacccagacaaaggagagaaatggtgatgtcattgtatac
agcgctagaaagcggccaaatttgggcaaaggtaaagaaaacagggaagttacttttctg
accaaaagtgaggcaggctctggggaaacaactcaagaattccctactgaaaaggggaaa
agaccaactttgaccttcacttcacggaaaacttctaaggcatctgggtacaggaggatt
atggacactagtttcagacaaactgagggcaaaagcactgtttcaaaacagcatcagttg
ctgcttgatgagtcaaggatgcacacaacagacataaatgggccctctgtatccagttgt
agcaagtctaaagctaagtctttttcagatcgaaagaacaaggaatttggagaaaacgaa
tcatctgctcacaaactcttcactgtcaaaggctcagagtcttttcaggtggacgaaatg
caaccagagagcaaagatataatggaggaattacttacagagccttccactactaataaa
accaatcctaaagaaacagtgaatcccctggaagctagggatactgtagtgagtgatgct
ccacccaagaatatggagatagatgatattatgcgagacctgggaatttctagcaggtca
gcgaaaaatgaatacatgggtgttaaacagggcaaaatccaaccagttacaaactgtgct
gaaaagattcctgccaaacaacaaatggttctaggcacagatctttgtaatgatggagtc
agcagttctgcaaacatgcacgtgagcactagtgctagcaaacagaaaactgatgaaaat
aaatcctttcattttcaaattcaaaatgatggcaaaacatgtactgaaaagcccaatgga
atattgttacaaactggaggcgtgggtaaagcagataatcagcctgaggattttctgaaa
gactccacagtaaaatccagagctgtttgtgttgcaaaagatattaaaaatggttattct
cctgatctgtattcagtttccaaagaatttgaagacagcttccagttggatacacagact
gataggatattacaacagcaggtggcagctgaaattgcaagacagcagggagaaaaagat
acagagcgggcagagatacctgtgcagaaaatctccatgaaactacactgtgccagcact
tcacaaaatgaagatgttgcaaatgaaaagctagctgcagcacttagaaaagtggtctgt
tcaaatcttgggacaagaaataccacgaaagaaaacacagatttacattgcactaatgct
ttgggttctggaagccctaatttacagcctgcaatgaaatgcacagaatctgcattttgc
tttaaaggaaatgatttttctttcactgactcacaactatgtagctttttacaaggttat
cagacccaaaattcagtgaaggaaagtgcttctcaaggtcttcagaaggcagtctctccc
gccaatgcccagtgccctaacactgtgcttgtacaagttgagtgccatccccctcctgaa
actagtctgaatatgagtgacagtttattgtttgatgatagcttcagttatgtcaatggc
cctccagatatgcacacagatgaggctgaagggacagaatctggggaacagaaggttgtg
actcctccctctaaagccacttccagctctcttgctgatattttgcatcagcagaacctg
gatcccattcaggatatattaactgtcaatgtaaactggaatgagcatcagcatccagca
cagtgtaatgatgtgtctgttatattctctgatatagattctttgcagatagctgaagct
ttaggtaatgtagacttgtctccttgtcaaggagacagtctgtctgcagctcttgttaag
ctagggttaagaaaaccaaggcgtgaggaagatgatcctagaccagaggggacaagcctg
gatcaaggtgcaagtccccagaatgcccaacaagctgtggaaaagaataccaatccagtg
gtatggtctgatcattcatttgacataagcccagggttgcaagatattttagacagatgg
cctagtccttcagataataaacctgttgttttaagtccaagagtctcctcctcaaaagga
aagttggtaatctcaaatagtaaacaagagccaggtgcaatttctgaattcagctattgt
cagagagagtcattatccacttgccagggtttaaagaactatttcaaagttagagagagc
aataagggaaccctggatgttcagaaaccagcttataaccctctgctgctcaagggaagc
aacagaatatttgacccccagccggatatcagaaaaggacttattcctccaacgcctcct
aaggaacctgttccaaaaagttttggcacgtcttctctaacgtttggaaaaaacaaaaat
gtcagccacatagatgaagtaccaccttttcagccactgcagaatggcaaacctagttca
gaccaccatatagaaacactgccatttaagcctggtaatggagaaacatgtgaggctttg
cttgagactaaccccgtaaaagacaattctattatagaccaaggcttttcattgcaatta
tctcaacatgttttgccacttatttcatgcagtgctgaaagcttcactattattgatgtg
gcaagtgacaaagctctcttccagaccttcatcagagaatggaggaacaatagcagattt
gccatctcggtggcttgtgaaagaacaaaatgtctcttgtcccccaagtcaactataggt
ggcagattcaaacaagtaagatctccccagcggatccaggttaaagatgatgggtttcct
atcaaaggctgtgaagacatcttggtagttggattgtctgtatgctggggtggcaaggat
gcctactatgtctcattgcagcagaaacaagacgaccagactgaaatcagtgccagcttg
gcaccacctcctttggatcagaacctgtctgtgactgagagattatgtcaagtacagtcc
tgcttgcagaaggaatctgagagcgcgcactcacttgtcatgtacaacttcatccagcac
tataagacccttctgttggcttgtggcatctccctggaaggaagtttcgaggacccaaag
gtagcatgctggctgctggatcctggctctaaggagcgtacccttcacaacatggtaacc
aactttctccctcacgaactgcccttgcttgaagggatgggaactggtcaaggagttcag
agcctgggacttagtgccaatgctgattactctggccggtaccgagcagccatagaatct
gtgctcatcttcaacaccatgaaccaactcaattccttgttgcagaaggaaaatctaaca
gatgttttccataaagtggagatgcccacccaatactgcttggccctgctggaactgaat
ggaataggttttagcacaacagagtgcgagacccaaaaacatgtcatgcaagctaaactg
aatgagattgaggcccaggcttatcagatggcaggccacagcttctctttgaccagccct
gatgacattgcagaggtcttgtttttggagctgaagttgccaccaaatggagacatgaaa
atacaagggaacaagaaaactctgggttataccagaagagctactgctaatggaaacagg
gtcaggttgggcaagcagttcagtacgaccaaggatgttttggaaaaattaaaggcctta
cacccattaccgggcctgattctagaatggaggaggatcaccaatgcaatgaccaaagtg
gtgtttccactgcagagggagaaacgtttgaatcctgcactggggatggagaggatctat
cctatatctcagactcacactgctacaggtcgcataagcttcatggaacctaatatccag
aatgtgccaaaagactttgagattgaaatgccaaccgtggttggagagagcccaccgtcc
caagcacgagggtgtggtgctacttttcctgggggcagaggtagaaagcggtgcagtacc
ttgccttgtggcctcaaggttctggctgatgaaggaaccaaagaaagagggatgccattt
tctgttagcatgaggcatgcttttgttccttttccaggaggtttaatcttggctgctgat
tactcccaactcgagctgaggatccttgctcacttgtctcgggaccgccggctcattgag
gtcttgaacagtggagctgatgtcttcaagagcattgcagctgaatggaagatgattgat
gctgaagctgttggagatgagataaggcaacaagccaagcagatttgctatggaatcatc
tatggaatgggagctaaatctttaggagaacagatgggtattgaggaaaatgatgctgcc
tgctacatcgaatccttcaaatccagatacccagggattcaaaaattcctgagggagacg
gtgaagaaatgcagcagggatggttttgtgcagaccatcctggggaggcgcagatacctg
ccagctatcaaagatccaaacccttacagcaaagctcatgcagagcgccaggctgtgaac
acagcagttcagggttctgctgctgacattgtcaaaacagccactgtgaacattcagagg
cgccttgaagcattcccctcggcagtgaagtcccatggacatctggagagctcattccag
agcaacagggcaggaaggttagagcggagaagaaacagagggatgttacagagtggaggt
ttcttcatcctccagctccatgatgagctcctctatgaggttgcagaagatagtgtaata
caggtagctcagattgtcaaatttgagatggaaaatgccataaaactctcagtgaagctg
aatgttaaagtgaaaattgggcctagctggggagacctgcaggagctggagttgtga

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