Trachemys scripta elegans (red-eared slider): 117886505
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Entry
117886505 CDS
T07347
Symbol
STXBP5L
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117886505 (STXBP5L)
Membrane trafficking [BR:
tst04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117886505 (STXBP5L)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
117886505 (STXBP5L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Lgl_C
Beta-prop_WDR19_1st
Synaptobrevin
Beta-prop_NUP159_NUP214
Beta-prop_EML
Beta-prop_VPS8
RAB3GAP2_N
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
117886505
NCBI-ProteinID:
XP_034644270
LinkDB
All DBs
Position
1:complement(143495002..143804554)
Genome browser
AA seq
1242 aa
AA seq
DB search
MKKFNFRKVLDGLTASSPGGSSSGGSSSGGGIGAGSGSVHPGGTAGAAGTPRDEIQEILS
SDYFQICKTVRHGFPYLPTALAFDPVQKILAVGTRTGAIRILGRPGVDCYCQHESGAAVL
QLQFLINEGALVSASADDTLHLWNLRQKRPAILHSLKFNRERITYCHLPFQSKWLYVGTE
RGNTHIVNIESFILSGYVIMWNKAIELSTKTHPGPVVHLSDSPRDEGKLLIGYENGTVVL
WDLRSKRADLRVYYDEAIHSVDWHHEGKQFMCSHSDGSLTLWNLKSPSRPFQITIPHGKI
QRDGKKPESCKPILKVEYKTCKSSEPFIIFSGGLSYDKACRRPSLTIMHGKAITVLEMDH
PIVDFLTLCETPYPNEFQEPYAVVVLLEKDLIVVDLTQSNFPIFENPYPIDIHESPVTCT
EYFADCPPDLIPVLYSVGAKHKKQGYSNKEWPISGGAWNLGTQTYPEIIITGHADGSIKF
WDASAITLQMLYKLKTSKVFEKQKLGEGKPTTEIVEEDPFAIQMMYWCPESRIFCVAGVS
AYVIVYRFSKHEVNTEIVSLEVRLQYDVEDIITPEPEIIPPFPDASSQLPSLKSLSGSTN
TVACEGTMKDSIPCLSVKTRPVRMPPGYQAELVIQLVWVDGEPPQQITSLAINSAYGLVA
FGNCNGLAVVDFMQKTVLLSMGTIDLYGSSDPYQRQPRSPRKNKQFSADNFCMRGLSNFY
PDLTKRIRTSYQSLTELTDSPVSLELERCKSPTSVKGSRKLSLPTDLKTDLDHVNGHCTS
PTSQTCSSGKRLSSADVTKSNRRGPGRPPFRKAQSAACMEISLPVTTEVGYISRRAMLQQ
LHGVSTFSHDERHYAAYTWMDKENRENTFSRSRSSSVSSIDKESKEAITALYFMETFSRK
NDSTVSPCLWVGTGLGMVLIISLNLPATEELRQTEPVMVSPSGTVLTLKGAVLTFSCLDC
MGALIHSPYEVWRDPNSIDDSEKTRKRKLVMYSPSSSQDMGDHQFAVICSEKQAKVFSLP
SQTCLYVHNITETSFLLRADVVTLCNSICLACFCANGHIMTMSLPSLRPMLDVNYLPVTD
MRIARTFCFTNEGQALYLSSPTEIQRLTYSQEMCDNLQDMLGDLFTPVETPEAQNRGFLK
GLFGGSGQTFDREELFGEASAGKASRSLAQHIPGSGGIEGMKGAAGGVIGDLARARLALD
ERGQRLGELDEKTASMMASAEAFSKHAHELMLKYKDKKWYQF
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatttaatttccgcaaagttttggatggtttaactgcctcatctcctggtggc
agtagcagtggtggcagtagcagtggtggtggaattggggctggaagtggatccgtgcat
ccaggagggactgcaggtgctgcagggacacccagagatgagatccaggaaatcctatct
tcggattatttccagatttgtaagacggttcgccatggttttccttatttgcccactgcc
ttagcttttgacccagttcagaaaattctggctgtggggacaagaacaggagccatacga
atactgggcagacctggtgttgattgctactgccaacacgaaagtggtgccgcggtactg
cagctccagttcttaatcaatgagggtgccttggtcagtgcgagtgcagatgacacgctt
catttgtggaacctaagacagaaacggccggctattcttcattctctgaaatttaacaga
gaacggattacttactgccatctacctttccaaagtaaatggctctacgttggaacagag
aggggaaatacacatattgtaaatattgagtccttcattctttctggatacgttataatg
tggaacaaggcaatagaactatccacaaagactcaccctggcccagttgtacacttaagt
gatagcccaagagatgagggaaaactattaataggctatgaaaatgggacggtagtactc
tgggacttgcgatcaaaaagagcagatttaagagtttactatgatgaggctattcattct
gtagactggcatcatgaggggaagcagttcatgtgcagtcactccgatggcagcttgact
ctgtggaacttgaaaagtcctagcagaccatttcagataacaatcccacatggaaaaatt
caaagagatgggaaaaaacctgagtcttgtaaaccaattcttaaagtagagtacaagaca
tgtaaaagcagtgaaccatttataatcttttctggtggactgtcctatgacaaagcttgt
cgaagaccaagtctaaccatcatgcatggaaaagctattacggtgcttgaaatggatcac
cctatagtggactttttaactctttgtgaaacaccatatccaaatgaatttcaagaaccc
tatgctgtagttgtactattggaaaaagatctcattgttgttgacctaacacaaagcaat
tttccaatctttgaaaatccttatcccattgacattcatgagtcaccagttacctgcaca
gaatattttgctgactgtcctccagatttgattcccgtattgtattctgtaggagctaaa
cataaaaagcaaggatacagcaataaggaatggccaatcagtgggggagcatggaaccta
ggaacacagacatatcctgaaattattattacaggtcatgcagacggatcgataaagttt
tgggatgcctctgccataactctacagatgttgtacaagttaaaaacctcaaaagtgttt
gaaaaacagaagctaggggaaggaaaaccaacaactgagattgtagaagaagatcctttt
gccattcagatgatgtactggtgccctgaaagccgaatattctgtgtggcgggagtctct
gcatatgttattgtttacagattcagcaaacacgaagtgaatactgaaatagtgtcatta
gaggtgcgacttcagtatgacgtagaagatatcattactcctgaaccagaaataattcct
ccgtttcctgatgcctcatcccaacttccttccttaaagagcctttcaggcagtaccaac
actgtggcatgtgaaggaacgatgaaggacagtatcccatgtcttagtgttaagactcga
cctgtgcgaatgcctcctgggtaccaagcagaacttgttattcagttggtatgggtggat
ggtgagcctccacaacaaatcaccagtctggccataaactcagcctatggactagttgca
tttgggaactgcaacggtttggctgttgtggattttatgcagaagacagtattgctgagc
atgggaaccattgacctatacggatcaagtgatccataccagcgtcagccccgttctcca
cgcaaaaacaagcagttctctgcagacaacttttgcatgcgtggcctgtctaacttttat
ccagatttaacgaaacggatccgtacttcctatcagagcctgactgaactcactgacagt
ccagtttccctggagctagagcgttgcaagtctcccacttcagttaaaggatcaagaaaa
ttaagtctgccaacagatcttaagactgatcttgatcatgtaaacgggcactgtacaagc
ccaacctcccaaacttgcagctctggaaaacggctctctagcgcagatgttacaaaatca
aatcgccgagggcctgggaggcccccatttagaaaagcacagtctgcggcttgcatggag
atttcccttccagtcacaacagaagtaggttacatttccagacgggcaatgcttcagcaa
ttacatggagtcagtacattctcacacgacgagcgtcactatgccgcttacacatggatg
gacaaagaaaaccgggaaaacaccttcagccggtcccgaagctccagtgtctccagcatc
gacaaggagtccaaggaagcaattacagctttgtactttatggagaccttttcacggaag
aatgactctacggtctccccctgtctgtgggttggaacaggccttggtatggtcttaatc
atctcccttaatctgcctgctactgaggaattaaggcagacagaaccggtcatggtgtct
ccaagtggtacagttctgacactgaagggagcagtgctgactttttcatgcctggactgc
atgggagcattgatacattcaccctatgaagtatggagggatccaaacagcatagatgat
agtgaaaaaacgagaaaaaggaaacttgtcatgtattctccttcgtcctcccaggatatg
ggagatcatcagtttgctgtcatctgctcagaaaaacaagccaaagtgttctcactgcct
tcccagacatgcctctatgttcacaacatcacagaaacgtcctttctattgcgagcagat
gtggtgaccctgtgtaacagcatctgcctggcttgcttttgtgccaacgggcatatcatg
acaatgagcttgcccagccttcgcccaatgctggatgtcaactatttgccagtaacagac
atgaggatagcacggacattttgtttcaccaatgaagggcaagctttgtatctcagctct
cccacggagatccagcgactgacatacagccaggagatgtgtgacaatctacaggacatg
cttggggatttgtttaccccagtggaaacaccagaagcccagaacagaggctttctcaag
gggctgtttggaggaagcgggcagacctttgacagagaagagctgtttggcgaggcttca
gcaggaaaagcctctcggagtctggctcagcacatccctggctcgggtggaatcgagggt
atgaaaggagctgcaggaggggtaatcggagacttggctcgtgcgcgcctcgcccttgat
gagagaggacagagactgggagaattggatgaaaagactgcaagcatgatggctagtgca
gaggcattttccaaacatgcacatgagttgatgctgaaatataaggacaagaaatggtac
cagttttag
DBGET
integrated database retrieval system
