Trachemys scripta elegans (red-eared slider): 117886551
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Entry
117886551 CDS
T07347
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117886551 (TDRD12)
Enzymes [BR:
tst01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
117886551 (TDRD12)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Gene silencing
piRNA pathway
117886551 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
117886551
NCBI-ProteinID:
XP_034644368
LinkDB
All DBs
Position
13:complement(21655969..21796870)
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AA seq
1252 aa
AA seq
DB search
MKMIEVLILKIEDPGCFWVIVKGCRTFVDSEMEYKKLHAEMNQFYNRDVEEVKPLTLEEG
QVCVVFCQELKCWCRAVVKSILFCADHYLAECFLVDYAKYTPVKTKDIRVAVEAFMQLPY
RAKKFRLYCTKPVTLRIDFCEDASEIVPAKRWDSAAIQYFQNLLKGTTQIEAKLCAIEDD
NFDVYLYVTIKDEKICVNDDLVAKNFACYVMTKENTVNSAKNQKPWSSLSLKSSPEKVIS
PALALWPMLMQGKVHNNLETSGDASNFFLEKTCRKIAAPALNGKTESTVRATVGFSLKEN
INISAQPTVQVNRLLQFLNPDSLKTDDIQYEQQEFQKINTAQPPIVLSNKIEPRSVLETT
PLLVDLKKELLRNKFLGPNLTESYCWPPIARGCDSVVISHHGNDPLLYIPPVLTFLRSGS
CYKSLPTRNGPIALIICPGWRKAQLVFELLEKYGRCSRPLHPMLILLGLNKEEAKNVKLQ
RGCEVIVTTPHSLLRLLEHHSLFFLRLCHLVFDEVDNLFSEASKQIFTILEYYKKTITIE
ERESAPHQIVAVGSHWSKHIEHLTKEFMNDPYIVITAMEEASIYGNVQQVVQLCLNCERI
SVLLQILDFTPSKAQKTLIFTNSVDETEMVYKAVVSSSIFCLKAHREIEFHFKYAVEQWK
KNFSSGSHVVLVLTDDCMPSLGITDATCVVHFSFPASPRVFGVRLHSMSDNFQNVLEKGS
SIDQVYTKAKSILLLTERNGCHAVGVLRYLEHTDAKIPPELCDFTAGVLEAKEDMKLARP
LCQYLKRSGVCKDMRICPDRHRVHLQIDLPQEMSDNTIPMAGCVTIVPLHIVDATNYFGR
IIDKQKDQYTILVGEMIEYFKKARNKVSVEMVEKLALYGLHEEGLFHRVQVLEIPPKEEN
CFFCNVTIRYIDEGRTGRVQVHQLFHLPTRFQILPPQAVEFIVCRVKPIDNEIEWNPKVT
RYIHHKIRGKLHEAKIVLALGNTVWVDPMVRVTKLSELKTSINEYNIRSEILSMGMGIDN
PEHIKQLQKLCKHAKMLALEEKTLQTLSAPEQDADSPQSVPEKDVASPHSLLMGENFTDI
CNSSQMTLENHQCDTISELKKAEGSTQHHHKCFYPEIKWFQKEDTVTMKIKLRNVHDYKC
EFFGDKVVFSAFSGDKFYVADMELHANILKGKSVCVIKNEEPVIILAKDKKEFWCCLLKH
KIPNVSFDFEHWEDFEDKSPFPVGAQKAYHSSALITEEMEESSEDSGTESDD
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgattgaagtcttgatattgaagattgaagacccagggtgcttttgggtcatt
gtaaaaggatgcaggacttttgtagacagtgaaatggaatataaaaaactacatgctgaa
atgaatcagttctataacagagatgtggaggaagtaaagccattaacattagaagaaggg
caggtttgtgtggttttttgtcaggaactgaaatgctggtgtagagcagttgttaagtca
atcctgttctgtgctgatcattacctggcagagtgtttccttgtggattacgccaagtat
actcctgttaaaacaaaagacattcgggttgcagtggaagcatttatgcaactcccatat
agagcgaaaaagtttagactgtactgcacaaagccagtcactttgcgtatagatttctgt
gaagacgcttcagaaatagtacctgcaaagagatgggacagtgctgctattcagtacttt
caaaaccttctaaaaggaaccacccagattgaggcaaagttatgtgctatagaagatgac
aattttgatgtttatctttatgtaacaataaaagatgaaaagatatgtgttaatgatgat
ctcgttgcaaagaactttgcttgttatgtgatgactaaagaaaacacagttaattctgcc
aaaaatcaaaagccatggtcctcattaagtctgaagtcttctccagagaaagtgatcagt
cctgcacttgctctttggccaatgttaatgcaggggaaggtacacaataatcttgaaaca
agtggtgatgcttctaatttttttcttgaaaagacatgcagaaaaattgctgcacctgct
cttaatggaaaaactgagtctactgtcagagcaactgtgggtttctctttgaaggaaaat
ataaatatttctgcacagcctactgtgcaggtaaacaggctcctgcagtttttgaatcct
gattctttgaaaactgatgatattcagtatgaacagcaggagtttcaaaagattaataca
gcacaacctcccattgttctcagcaacaaaatagagccaagatcagttcttgaaacaaca
ccacttttggtagatctgaaaaaggagcttctccgaaataaatttctaggtcctaatctc
acggaatcttactgttggccaccaatagctcgtggatgtgactcagttgtcatttctcat
catggaaatgatcctcttttgtatattccaccagttcttacatttttacggtcaggaagc
tgctacaagtcactgccaactaggaatggaccaatagcattaatcatatgtcctgggtgg
aggaaagcacaacttgtttttgaattattggaaaaatatggcagatgctccaggccactt
catccaatgttgatattattaggactgaataaagaagaagccaaaaatgtgaaacttcaa
cgaggatgtgaagtgattgtaactacaccacacagccttttgagactgcttgaacaccat
agcttattctttcttagactctgtcatcttgtttttgatgaggttgataacttgttctct
gaagctagcaaacaaatatttactatattagagtattacaagaaaacaattactattgaa
gagcgggaatcggcaccacatcagattgttgctgttggaagtcattggagtaaacatata
gaacatttaacaaaagaattcatgaatgatccttacattgtgataacagctatggaagaa
gcttccatatatggaaatgtgcaacaggtggtgcaactttgcttgaactgtgagagaatc
tctgtattactccagatactggattttactcccagtaaagctcaaaagaccctgattttc
actaattctgtagatgaaacagaaatggtctataaggcagtggtgagtagttccatattc
tgcttgaaagcacacagagaaattgaatttcatttcaaatatgctgtagagcaatggaaa
aaaaattttagttctggcagccatgttgtgttagttttaactgatgactgcatgccatcc
ttgggaattactgatgcaacttgtgtggttcattttagttttcctgcttctccaagagtc
tttggtgtgcgcttacacagcatgtctgataacttccagaatgtactagaaaagggttcc
tctatagatcaagtatacacaaaggcaaaatcaatcttattgctgacagaaagaaatgga
tgccatgcagttggtgtactgcgttatttagaacacacagatgctaaaattccaccggaa
ctgtgtgactttacagcgggggtgcttgaggccaaagaagatatgaaacttgcaaggcct
ctttgtcagtaccttaaaagatctggtgtttgcaaggatatgagaatatgtccagatcgt
catcgggttcacttacaaatagacttaccccaagagatgtcagataacactataccaatg
gctggatgtgtcacaatagtacctctccacattgtggatgcaacaaactacttcggtcgc
ataatagataaacaaaaagatcaatatacaattcttgttggagagatgattgagtatttt
aagaaagccaggaataaagtgtcagttgaaatggtggagaaactagcactgtatggatta
catgaagaaggtctttttcacagggttcaagtgttggagatacccccaaaagaagaaaat
tgtttcttctgcaatgttactatccggtacatagatgaaggcagaactggtcgagttcag
gttcatcagctgtttcacttacctacaagatttcaaattttgcccccgcaagctgtggaa
tttattgtttgtagggtgaaacctattgataatgaaatcgaatggaaccctaaggttact
agatatattcatcacaaaattagaggaaaacttcatgaagcaaaaatagtgcttgccttg
ggaaatacagtttgggttgatccaatggtccgggtcaccaagctttcagagttgaagact
tctatcaatgaatacaatattcgatctgagattttgtctatgggaatgggaattgacaat
ccagaacatataaaacaacttcaaaagttgtgtaaacatgcaaaaatgttagctcttgag
gagaaaaccttgcaaactttaagtgcgccggagcaggatgcggacagcccgcagagtgtg
ccggagaaggatgttgccagtccacatagcttattaatgggagaaaattttacagacatt
tgcaatagctctcaaatgactttggaaaatcatcagtgtgatactatatctgaacttaag
aaagcagaaggatctacacagcatcatcataaatgtttctatccagaaataaaatggttt
caaaaggaagatactgttaccatgaagataaaattaagaaatgtacatgactataaatgt
gaattttttggagacaaggttgtattcagtgctttttcaggagacaaattttatgtggct
gacatggagttgcatgcaaacatacttaaaggaaagtctgtttgtgtgattaagaatgaa
gaacctgtgattatccttgcaaaagacaagaaggaattttggtgctgtctactaaagcat
aagattcctaatgtgtcttttgattttgaacactgggaagattttgaagataaaagcccc
tttcctgttggtgcacaaaaagcatatcattcttctgcattgataacagaagaaatggaa
gaatcctcagaagatagtggaacagagagtgatgactag
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integrated database retrieval system
