Trachemys scripta elegans (red-eared slider): 117886559
Help
Entry
117886559 CDS
T07347
Symbol
CDH16
Name
(RefSeq) cadherin-16
KO
K06810
cadherin 16, KSP-cadherin
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tst04515
]
117886559 (CDH16)
Cell adhesion molecules [BR:
tst04515
]
Cadherins
Major cadherins
117886559 (CDH16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_4
RibLong
Motif
Other DBs
NCBI-GeneID:
117886559
NCBI-ProteinID:
XP_034644383
LinkDB
All DBs
Position
13:complement(19306456..19371629)
Genome browser
AA seq
854 aa
AA seq
DB search
MFCPSSSMMRVSKCMFPVWLLIIYSSVIQVFPVLSAIYPTNSEEYIEVPENYGGSFPLYL
KKINNTLNGEADIQLAGNEEGLFGIDPESGILYVTRPLDREKQAFYTLQVTVKDEDKQLV
FNPVTITIAVKDENDNMPVLTEDTFSGILSKGTKQGTSFMRVSAIDLDDPSTPNADLRYK
ILTQTPSQPLENMFQVDSRTGAISLSAEGSSLLDSSQVSNYKLVVQVKDLGNQSLGYRAL
ANVEIAVVENTWITPSPVLLQEHLNVTYPKKISKVNWNSREVHYYLKESFPQGLFSIDLE
GNIYVTRALDRESQAEYEIEIFAENKDGMLYNEPLELLLTVMDENDNGPVFSQEIYQVEL
EENTAKGSEIITVKAEDADDPKTNNAKIAYEILSQEPQVSEGFLFHIGKDSGVITLQDSE
LKTNAAKYYHLLVLAADLAGTEGGLSSTCTVFIKVVDVNDSPPVFSQTKYGPFSFPEDTE
VGTLITTITATDADEEMKFKFVNFSVESGNEDETFKILSNPQNGTASIWLEKEFDYETVQ
EYVLIVSVRNDEELVGKEQDASSTATVHVLVKDVNEAPVLTQKRYEVSIPESVALGTVLL
TVKATDPDIHTPSLSYSLRNDSMNWLSIDEHSGEVRVMQALDREMMQDVYTVQVIAQDKG
SPSMMVTADIAIHILDVNDNSPFLVGDYSKSHLCTPQREKQSIIISAFDPDGEGNSVPLI
FALANSPMLQRNWRINLINDTHAYLTMGISWLEPKVHLVTIILKDSGTPFKAQHIQLPVT
ICLCTMEGECMQEVGRMEGKPTVISAVSVIVGTLGTIGFFVLIIFVHLTLLGANKKKKRK
ACDNLYSPYHDTAK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgttctgcccttcaagcagcatgatgagggtgtctaaatgcatgtttcctgtctggcta
ctgattatctactcttccgttattcaagttttcccagtgttgtctgcaatatatcccacc
aacagtgaagaatacattgaggtacctgaaaattatggtggttcattccctctgtatctg
aagaagataaacaacacgctcaatggtgaggctgacattcagttggctggaaatgaagaa
ggcctatttggaatagatccagagtctggcattctctacgtcactagacccctggaccgg
gagaaacaagctttctacactcttcaggtgactgtaaaagatgaagacaagcagctggtt
tttaaccctgtaaccataacaatagcagtaaaagatgaaaatgacaacatgccagtcttg
accgaggatacgttctctggaattcttagcaaagggacaaagcaaggaacgtctttcatg
cgggtcagtgctattgacttggatgacccttccacaccaaatgctgatctacggtataaa
atcctcactcagactccaagccaacccttagagaacatgttccaggtagattcaaggaca
ggggctatttcattatctgcagaaggtagctctttgctagactcatcccaggtcagcaat
tataaactagttgtgcaagttaaagacctaggaaatcagtctttgggatatcgtgcatta
gcgaacgttgaaattgcagttgtggagaacacctggataaccccaagtcccgttctcctt
caagaacacctaaatgtaacttatccaaagaagatttcaaaggttaactggaatagcaga
gaagtccattactatctgaaggagagcttccctcaaggccttttttcaattgacctagaa
gggaatatctatgtgacacgagcactggacagagaaagccaagcagagtatgagattgag
atttttgccgagaacaaggatggaatgctgtacaatgagccactagagctcctgctaaca
gtgatggatgagaacgacaatgggccagtattctcccaggagatttatcaggtagaactt
gaggagaacacagccaaagggagtgagattatcacagtaaaagcagaagatgctgatgac
ccaaagaccaacaatgctaaaattgcttatgagatattgagccaggagcctcaagtgtca
gaaggctttttatttcatattgggaaagatagtggagtgataacattacaggattccgaa
ctgaagaccaatgctgcaaagtactatcacctccttgttctcgcagcagatcttgctggg
actgaagggggtctcagcagcacttgtacagtcttcattaaagttgtggatgtaaatgac
agccctcctgtattctcacagacaaagtatgggccattcagttttcctgaggatacagaa
gtaggtacattaataacaacaattacagcaacagacgcggatgaagagatgaagttcaag
ttcgtaaacttttccgtggaatcaggaaatgaagatgaaactttcaaaattctaagcaat
ccgcaaaatggcacagccagcatctggcttgaaaaggaatttgactacgagactgttcag
gagtatgttttgattgtctcggtgagaaatgatgaagaactggttgggaaagagcaggat
gctagctctacagctacagtgcatgtgttggttaaggatgtaaacgaagcaccagtgctt
acacagaaaaggtatgaggtcagcataccagaaagtgtggcgttgggaacagtgctactg
actgttaaggctactgatcctgacattcacacaccatcattaagttactccctaagaaat
gattcaatgaactggctttccattgatgagcattctggagaagttagagtcatgcaggct
ttggacagagaaatgatgcaggatgtttatacagtgcaggttattgctcaggacaaaggt
agcccatcaatgatggtcactgctgatatagcaatccacatcttggatgtcaatgacaac
tctccattcctagtaggagactactccaaatcccatctctgcacacctcagagggaaaag
caatccatcattatcagtgcatttgatcccgatggggaaggaaacagtgtcccattgatt
tttgctcttgccaatagccccatgcttcagagaaactggaggatcaacctgatcaatgac
acacatgcttatctcaccatgggaatcagttggctggaacccaaagtgcaccttgttacc
attatcctgaaagacagtgggactccatttaaagcccaacacattcaactaccagtgact
atttgcttgtgtaccatggaaggagaatgcatgcaagaagttggaaggatggaagggaag
cctacagtgatttctgcagtaagcgttatcgttggtaccttgggaactataggtttcttc
gtgctcataatctttgttcatttgaccctcctgggagctaataaaaagaagaaacgcaaa
gcttgtgacaacctttatagtccgtaccatgacacagcaaaataa
DBGET
integrated database retrieval system
