Trachemys scripta elegans (red-eared slider): 117886597
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Entry
117886597 CDS
T07347
Symbol
SMPD3
Name
(RefSeq) sphingomyelin phosphodiesterase 3
KO
K12352
sphingomyelin phosphodiesterase 3 [EC:
3.1.4.12
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00600
Sphingolipid metabolism
tst01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
117886597 (SMPD3)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
117886597 (SMPD3)
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
CBM_6
Motif
Other DBs
NCBI-GeneID:
117886597
NCBI-ProteinID:
XP_034644460
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All DBs
Position
13:34473051..34539831
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AA seq
664 aa
AA seq
DB search
MVLYTSPFPNSFLSVLHSFSWGLIFPCYWFADRLVASFVPTTYEKRQRADDPCYFQALCI
IITTPIYLALLVASLPFALIGFLLWSPLQSARRPYIYSRLGDKSQANGATLLTEWKATGN
GKSFCFGSANVCLLPDSLARFNNVFNTQARAREIGRRIRNGASRPQIKIYIDSPTNTSIS
AASFSSLVSPQVGDSTNRAVNVGIKRTSSMEYKGDNSGSNNSEDSRDAKAGGELNEGEDN
NTCIVRISGEDNGHISDPEVDAISGQANISSPAEHSLEGERESPKGQIPNHKQKEGDSGS
LDSYTASRESLVKVRIGDGTVDQSNINNKLLYKASVMKKTSVRKKKHTDEIFDHEISAFF
PANLDFLCLQEVFDKRAAEKLKQQLHHYFEYVLYDVGVYGCHGCCSFKFVNSGLLFASRY
PIMDAAYHCYPNGKGTDSLASKGALFLKVQVGNTPQDQRIVGYISCTHLQALAGDTTVRC
EQLDLLQDWLADFRKSTSSSSTANPEELVAFDVICGDLNFDNCSSEDKLEQQHSLFTRYK
DPCRLGPGEEKPWAVGTLLDPEGLYDEEVCTPDNLQKVLESEEGRKGYLVYPTSKNHSSS
QKGRKASLKGSGRRIDYMLYTEEGVYLEWKVEVEEFNFITQLAGLTDHLPVAMRLMVSTG
EEDS
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggttttatacacttccccatttcccaacagctttctatcagttctgcattccttttcc
tggggcctgattttcccatgttattggtttgcagacaggcttgtggcctcctttgttcct
accacctatgagaaacgacaaagggcagatgatccgtgctactttcaagcactctgcatc
attattaccactcccatctacttggcactgctggtggcatctcttccttttgccctgatt
ggcttcttgttatggtcacctctccagtcagctagaaggccatatatctactccaggcta
ggagacaagagccaggccaatggcgctacactacttactgaatggaaagctacaggcaat
gggaaaagcttctgctttggtagtgccaatgtttgtctgctaccagactctctggcaaga
tttaacaatgttttcaacacacaggcacgggctagagaaattgggcggagaatcagaaat
ggggcaagcagaccacagataaaaatatatatagattcccccactaacacatccatcagt
gcagccagtttcagcagcttggtctctccccaagttggagatagcactaatcgtgctgtc
aatgtaggcatcaaaaggacatcatctatggagtacaagggagacaattctggttcaaat
aacagtgaggatagcagagatgctaaagctggaggggaactaaatgaaggagaggacaac
aacacatgtatcgtgcgcataagtggggaggataatggccacatttcagacccagaagtg
gatgccattagtggccaggctaatatcagtagcccagcagaacactccttggaaggtgaa
agagagagtccaaagggtcaaatacccaaccataaacagaaagaaggagattctgggagt
ttagacagctacactgcctcgcgagagtccctggttaaggttcgcattggagatggcaca
gtggaccaaagtaacatcaacaacaagctcctttacaaagcctcggtcatgaagaagacc
tctgtgaggaaaaagaagcatacggatgaaatctttgaccatgagatctctgctttcttc
cctgccaacttggacttcctgtgcttgcaggaagtgtttgacaaaagagcagcagagaag
ttgaaacagcagctccatcactattttgaatacgttctatatgatgttggggtctatggc
tgccatggctgctgtagctttaagtttgttaacagtggcctgctttttgccagccgctac
ccgattatggatgctgcctatcactgttaccccaatggaaaaggaacggactccttggct
tccaagggggccttgtttctcaaggtgcaagtgggaaatacacctcaggaccaaagaatt
gtgggatacatttcctgcactcatttgcaagctctggcaggagacactacagttcgatgt
gagcaacttgatctgcttcaagattggctggctgatttccgaaaatctacctcctcctcc
agcacagccaatccagaggagctggtggcttttgatgtgatctgtggagatctcaacttt
gacaactgctcatctgaggacaagctggagcagcagcactccctgtttacacgctataaa
gatccatgccggcttggtcctggggaagaaaaaccatgggcagttggtaccttgttagat
cctgaaggattgtatgacgaagaagtgtgcactccagataacctacagaaggtgctggaa
agcgaagaagggaggaaaggatacctggtctatcccaccagcaagaaccattcttcaagt
caaaaggggaggaaggcatcactaaaaggcagtgggaggaggattgactacatgctttac
acagaagagggtgtctacctggaatggaaagtggaagtggaagagttcaactttattaca
cagttagcaggtttgacagaccacctgccagtcgctatgcgtctgatggtatctacaggg
gaagaggattcttaa
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