Trachemys scripta elegans (red-eared slider): 117886608
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Entry
117886608 CDS
T07347
Name
(RefSeq) thyrotropin-releasing hormone receptor-like
KO
K04282
thyrotropin-releasing hormone receptor
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04020
Calcium signaling pathway
tst04080
Neuroactive ligand-receptor interaction
tst04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117886608
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117886608
04081 Hormone signaling
117886608
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
tst04030
]
117886608
G protein-coupled receptors [BR:
tst04030
]
Rhodopsin family
Peptide
Thyrotropin-releasing hormone (TRH)
117886608
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
7TM_GPCR_Srw
7tm_4
7TM_GPCR_Srv
Motif
Other DBs
NCBI-GeneID:
117886608
NCBI-ProteinID:
XP_034644481
LinkDB
All DBs
Position
13:5864543..5874860
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AA seq
409 aa
AA seq
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MENSSKFDSPTNISLASSDAVFDVIEYKAISVFLVLVICGVGIVGNIMVVLVVLTTREMK
TPTNCYLVSLAVADLMVLVAAGLPNISDSLAGMWIYGHAGCLGITYFQYLGINVSSCSIT
AFTVERYIAICHPMRAHTMCTVSRAKRIIAFVWICTSIYCMLWFFLVDINVNKSQHLECG
YKVSRNLYLPIYLLDFALFFVTPLFVATMLYGLIGRILFASPIPDQAEATAEPWRERSGK
EKNGVDTRESKPSSRSRTRGALSSRKQVTKMLAVVVILFALLWMPYRTLVLVNSFMDNPF
LNPWFVLFCRLCVYANSAINPVVYNLMSQKFRAAFKRLCKCGGEPPPRSLYMATASYSLA
REPLPPTSQPLDHKEDKQPPTASNTALPKQQQPPRSKADIGDELYFSVV
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggagaacagcagcaagttcgacagccccacaaacatctccctggccagcagcgacgct
gtcttcgacgtgatcgaatacaaagccatctcggtcttcctggtgctggtgatctgcggg
gtggggattgtgggcaacatcatggtggtgctggtggtcctcaccacccgggagatgaag
acacccaccaactgctacctggttagcctggcagtggccgatctgatggtcctggtggct
gctggcttgcccaacatctcggacagcctggcggggatgtggatctatgggcatgctggc
tgccttgggataacctacttccagtatctgggcatcaacgtctcctcctgctccatcacg
gccttcaccgtggagaggtacatcgccatttgccacccaatgcgcgcccacaccatgtgc
acggtatcccgggccaagcgcatcattgccttcgtttggatctgcacctccatctactgc
atgctctggttcttcctggtcgacatcaatgtcaacaagagccagcacctggagtgtggc
tacaaagtctcccgcaacctctacctgcccatctacctgctcgactttgccctcttcttt
gtcacccccttgtttgtggccaccatgctgtacgggctgatcgggagaatcctcttcgcc
agccccatccccgaccaagctgaggccaccgctgagccctggagagagaggagcgggaag
gagaagaacggagtggacacacgggagagcaagcccagcagccgctccaggaccagaggg
gctctgtcctcccggaagcaggtcaccaagatgctggcggtggtggtgatccttttcgcc
ctgctctggatgccctaccggacgctggtgctggtgaactccttcatggacaaccccttc
ctgaacccatggttcgtcctcttctgccggctctgcgtctacgccaacagcgccatcaac
cccgtcgtctacaacctcatgtcccagaagttccgggccgccttcaagcggctgtgcaag
tgcgggggggagccgccgccccgcagcctgtacatggccacggccagctacagcctggcg
agggagcccctgccgcccacctcccagcccctggaccacaaggaagataaacagccccca
acagcgagcaacacggctctccccaagcaacagcagccaccacggagcaaggcagacatc
ggggacgagctgtacttcagtgtggtgtag
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