Trachemys scripta elegans (red-eared slider): 117886723
Help
Entry
117886723 CDS
T07347
Symbol
CDH15
Name
(RefSeq) cadherin-15 isoform X1
KO
K06809
cadherin 15, M-cadherin
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04514
Cell adhesion molecule (CAM) interaction
tst04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117886723 (CDH15)
04519 Cadherin signaling
117886723 (CDH15)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tst04515
]
117886723 (CDH15)
Cell adhesion molecules [BR:
tst04515
]
Cadherins
Major cadherins
117886723 (CDH15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Cadherin_3
Cadherin_CELSR2_9th
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
117886723
NCBI-ProteinID:
XP_034644644
LinkDB
All DBs
Position
13:complement(5003237..5026156)
Genome browser
AA seq
816 aa
AA seq
DB search
MESPCLLAFCLLAPLWAQIWTGYRACLCTPDVFGTRAFDALTGVAKGINLSQGEAGLPAS
PLVLYPWRQRAGPSRVKRAWVIPPISVSENHKRIPHLLVQIKSDKQLPGGVIYSIKGPGV
DEEPLGIFSIDKLSGKVFLNTMLDREKNDRFRLRAFALDLGGATLEDPTDLEIVVVDQND
NRPLFQQEVYTGHVVEGAVPGTYVLKAEATDADDPDTDNAALRYSILEQGSAGLFSINET
TGEIRTVQVGLDREVVSVYNLTLQVADMSGDGLATTATAVIYVDDINDNPPEFTKPEFSV
EVLENTSGVDIGRLLVHDKDLPGSPNWLARFTILEGDPDGAFAIRTDPRTNDAVLSVVKA
LDHEGRDHFALTVSVQNQNQLHPSAPQTTRALAMVQVQVQDVNEAPFFPKNPRLARVAEG
APPGTELTTFSASDPDTRQPQALSYSLAYDPADWLLLDPRSGMVQTKRELPRRSPFLQGS
WYTAVILASDNADPPSTATGTLSIEIVEVNDHGPALLPLVGVMCSEPSKGRGLLLSAMDE
DLPPHAEPFHFRLSPDAPQLAHNWSLSQLNATHAVLAVLVPVPAGLHSLPLLLSDSGTPR
QERAQLLNVSVCPCDEGGSCQASAAAASTAGAGLSFGALMIILSSVILLLSLALLAAVRE
RCHRRPRHEGLLGSSQDDLRDNILNYDEQGGGEEDQGAYDINQLRNPDFFPPPCPLGKQP
IRRDTPYSYATPPYPRKLPTSPSDIEDFINEGLEAADSDPNVPPYDTALIYDCEGSGSVA
GSLSSIVSSLTDGDQDYDYLSEWGPRFRRLADLYGH
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcccctgccttctcgccttctgcctcctggcacctctctgggctcagatatgg
actggctacagagcatgcttatgcacaccagatgtgttcggcacacgcgcctttgatgcc
ctgacaggtgtggctaagggcatcaacctctcccagggggaggctggcctccccgccagc
cccctggtcctgtatccatggcgacagcgagctgggcccagcagggtgaagagggcctgg
gtgatcccacccatcagcgtgtccgagaaccacaaacgcatcccccacctcctggtgcag
atcaagtcagataagcagctgcctgggggcgtcatctatagcatcaaggggccaggcgtg
gacgaggagcccctgggcatcttctccattgacaagttgagcgggaaggttttcctcaac
accatgttggaccgggagaagaacgaccgcttccggttgagggcctttgccctggacctg
gggggcgcgaccctggaagaccccactgacttggagatcgttgtggtggaccagaacgac
aaccggcccctgttccagcaggaggtttacacggggcacgtggtggagggagccgtccca
ggcacctatgtgctgaaggcagaagccacagacgctgacgaccccgacacagacaacgcg
gccctgcgatactccatcctggagcagggctccgccgggcttttcagcatcaatgagacc
acaggcgagattcgcaccgtgcaagtggggctggaccgtgaggtggtgagtgtgtataac
ctgactctccaagtggccgacatgtcgggcgacggcctcgccaccacagccaccgccgtg
atctacgtggacgacatcaacgacaacccgcccgagttcaccaagccggagttctctgtg
gaggtgctggagaacacgagcggcgtggacatcggccggctcctggtgcacgacaaggac
ctgcccggctcccccaactggctggcgcgattcaccatcctggagggtgacccggacggg
gccttcgccatccgcaccgacccccgcaccaacgacgccgtcctctccgtggtgaaggcc
ctggaccacgaggggcgggaccacttcgcgctcaccgtctccgtccagaaccagaaccag
ctgcacccatcagccccccagaccacgcgggccctggccatggtgcaggtgcaggttcag
gacgtgaacgaggcacccttcttccccaagaacccccggctggccagagtggcggagggg
gcgccgcccggcactgagctcaccaccttcagcgccagcgaccccgacacccgccagcct
caggccctcagttactccctggcctacgacccggccgactggctgctgctggacccgcgc
tccgggatggtgcagaccaagcgggagctgccacgccgctcgcccttcttgcagggcagc
tggtacaccgctgtcatcctggccagcgataatgctgacccgccgagcacggccactggc
accttgtccatcgagattgtggaggtgaacgaccacgggccggccctgctgccgctggtg
ggcgtcatgtgcagcgagcccagcaaggggcgggggctgctgctgagtgccatggacgag
gacctgccgccccacgccgagcccttccacttccgcctcagccccgatgccccccaactc
gcccacaactggagcctcagccagctcaacgcgacccacgcggtgctggcggtgctggtg
ccggtgcccgcggggctgcactccctgccgctcctgctcagcgactccgggacgccccgg
caggagcgggcgcagctgctgaacgtctccgtgtgcccctgcgacgaggggggcagctgc
caggccagcgcggcggctgcctccacggccggggcggggctcagcttcggggccctgatg
atcattctcagcagcgtcatcctgctcctgtcgctggccctgctggcggccgtccgggag
cgctgccaccggcgcccgcggcacgaggggctgctggggagctcgcaggacgacctgcgc
gacaacatcctcaactacgacgagcagggcgggggcgaggaggaccagggcgcctacgac
ataaaccagctccgcaatcctgacttcttccccccaccctgccccctgggcaagcagcca
atccggagagacactccctacagctacgccacccccccgtatccacggaaactgcccacc
agcccctctgacatcgaagacttcatcaatgagggtctggaagcagctgacagtgacccc
aacgtccctccctacgacacagccctcatctatgactgcgagggctccggctccgtggcc
ggctcgctcagctccatcgtgtccagcctgacggatggcgaccaagactacgactacctc
agcgagtgggggccgcgcttccgccggctggcggacctgtacgggcactag
DBGET
integrated database retrieval system
