Trachemys scripta elegans (red-eared slider): 117886738
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Entry
117886738 CDS
T07347
Symbol
TUBB3
Name
(RefSeq) tubulin beta-3 chain
KO
K07375
tubulin beta
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04145
Phagosome
tst04540
Gap junction
tst04814
Motor proteins
tst05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117886738 (TUBB3)
09144 Cellular community - eukaryotes
04540 Gap junction
117886738 (TUBB3)
09142 Cell motility
04814 Motor proteins
117886738 (TUBB3)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117886738 (TUBB3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117886738 (TUBB3)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tst04812
]
117886738 (TUBB3)
04147 Exosome [BR:
tst04147
]
117886738 (TUBB3)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
117886738 (TUBB3)
Cytoskeleton proteins [BR:
tst04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
117886738 (TUBB3)
Exosome [BR:
tst04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117886738 (TUBB3)
Exosomal proteins of colorectal cancer cells
117886738 (TUBB3)
Exosomal proteins of bladder cancer cells
117886738 (TUBB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
7tm_1
7tm_4
7TM_GPCR_Srsx
Misat_Tub_SegII
7TM_GPCR_Srx
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
117886738
NCBI-ProteinID:
XP_034644672
LinkDB
All DBs
Position
13:complement(4287388..4306046)
Genome browser
AA seq
810 aa
AA seq
DB search
MSTLASLQVLLNSLNSTAPSNRTDKTANRSSPWCQGVFIPNELFLTLGLVSLVENVLVVT
AIIKNRNLHSPMYYFICCLAVSDMLVSVSNLVETLFMLLMEHGVLVLQTSIVRQMDNVID
MMICSSVVSSLSFLGAIAVDRYITIFYALRYHSIMTMQRAVIIIVGIWVASTISSSIFIA
YYKNNAVILCLIGFFLSMLILVVGLYIHMLSLAHHHAKNISRLQKKRTVHQMTSMKGAVT
LTILLGVFFMCWSPFFLHLTLIVTCPKNPFCTCFFNYFNLFLILIICNSVIDPLIYAFRS
QELRKTLKDVVLCSCGRPGAAAGAYKRLRQALGRFPQPPARSAPAPPSRLHQPQPPPRAS
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEASSHKYV
PRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRG
LKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEMYEDDEEESEAQGAK
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgctggcttctctgcaggtgctgctcaactccctgaactctactgcccccagc
aacaggaccgacaagacggccaacaggagcagcccctggtgccagggcgtcttcatcccc
aacgagctcttcctgacgctgggcctcgtcagcctggtggagaacgtactggtggtcacg
gccatcattaagaacaggaatctgcactcacccatgtactacttcatctgctgcctggct
gtgtccgacatgctggtgagcgtcagcaacctggtggagaccttgttcatgctgctgatg
gagcacggcgtgctggtcctccagaccagcatcgtccgccagatggacaatgtcatcgac
atgatgatctgcagctccgtggtgtcgtccctctccttcctgggggccatcgccgtggac
cggtacatcaccatcttctatgccctgcgctaccacagcatcatgaccatgcagcgggcg
gtgatcatcattgtgggcatctgggtcgccagcaccatctccagtagcattttcatcgcc
tactacaagaacaacgccgtcatcctctgcctcatcggcttcttcctttccatgcttatc
ctcgtggtggggctctacatccacatgctctccttggcacaccaccatgccaagaacatc
tccagactgcagaagaaacgcaccgtccaccagatgaccagcatgaagggggcggtcacc
ctcaccatcctgctgggggtcttcttcatgtgctggagccccttcttcctgcacctgacg
ctgatcgtcacatgccccaagaaccccttctgcacctgcttcttcaactacttcaacctc
ttcctcatcctcatcatctgcaactcggtgatagacccgctcatttatgctttccggagc
caggagctgaggaaaaccctgaaggacgtggtgctgtgttcctgcggccggcccggtgca
gcggcaggcgcctataaaaggctccggcaggcgctcggccgctttccgcagcccccagcc
cgctccgctcctgcgcccccgagccgcctgcaccagccacagccgccgccccgggccagc
atgagggagatcgtgcacatccaggcgggccagtgcggcaaccagatcggagccaagttc
tgggaggtgatcagcgatgagcacgggatagaccccagtgggaactacgtgggagactcc
gacctacagctggagcggatcagtgtctactacaatgaggcttcctctcacaagtacgta
ccccgtgcgatcctggtggacctggagcccgggaccatggacagcgttcgatcgggggca
tttggacatctcttcagacctgacaacttcatctttggtcagagcggtgctggcaacaac
tgggcaaaggggcactacacagagggtgctgagctggtggactctgtcctggacgtggtg
aggaaggagtgtgagaactgtgactgtctacagggctttcagctcacccactccctgggc
ggtggcactggttcgggcatgggtaccctcctcatcagcaaggtccgtgaagagtacccc
gaccggatcatgaacactttcagtgtggtgccttctcccaaggtgtccgacacggtggtg
gagccctacaatgctaccttatccatccaccagctggtggagaacacggacgagacctac
tgcatcgacaatgaggccctgtatgacatctgcttcagaacccttaaactggccacgccc
acctacggtgacctcaaccacctggtctccgccaccatgagcggcgtcaccacctccctg
agattccctggccagcttaatgctgacctgaggaagctggcagtcaacatggtgcccttt
cctcgcctccacttcttcatgccaggctttgcccccctcacagcccgtggcagccagcag
taccgagccctaaccgtccccgagctcacccaacagatgtttgatgccaagaacatgatg
gccgcctgtgacccacggcatggacgctacctgacagtggccacagtcttcagaggccgc
atgtccatgaaggaggtggatgagcagatgctcgccatccagagcaagaacagcagctac
ttcgtagagtggatccccaacaatgtcaaggtggcagtctgcgacatcccaccccggggg
ctgaagatgtcttccactttcattgggaacagcacggccatccaggagctcttcaagcgc
atctcagagcagttcaccgccatgttccgacgcaaagccttcttgcactggtacacgggc
gagggcatggatgagatggagttcacagaggcagagagcaacatgaatgacctggtgtca
gagtaccagcagtaccaggatgccacagctgaagaggaaggggagatgtatgaagacgac
gaggaggaatcggaggcccagggtgccaagtga
DBGET
integrated database retrieval system
