Trachemys scripta elegans (red-eared slider): 117886756
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Entry
117886756 CDS
T07347
Symbol
IRX6
Name
(RefSeq) iroquois-class homeodomain protein IRX-6
KO
K24889
iroquois-class homeodomain protein IRX
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117886756 (IRX6)
Transcription factors [BR:
tst03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
117886756 (IRX6)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
SID-1_RNA_chan
Rib_recp_KP_reg
Protocadherin
CheC
Motif
Other DBs
NCBI-GeneID:
117886756
NCBI-ProteinID:
XP_034644693
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Position
13:32663297..32667590
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AA seq
484 aa
AA seq
DB search
MSFSQFGYPYSTTSQFFVSASPSTTCCETASRAVSDVSSGSAQAATICCPSYENRLLAST
RTELNAALGMYSSPYSAAAASQGYANYLPYGTDPSTLYTTLNPQYEIKDGTSSLHSGFAQ
PAAFYPYDHSLGQYQYDRYGTVDFSGSARRKNATRETTSTLKTWLYEHRKNPYPTKGEKI
MLAIITKMTLTQVSTWFANARRRLKKENKMTWSPKNKAGEERKDENKREEEEYGTENESK
AGQKSFKEEKELRLSDLDDLDEEEEDKLENDRTSAHLAASSASSALAESEKRDCSVTPPS
NFHPLPCNKAMPVAGGDFLETVGQKAASGAGTVSQGQQYEPTDKPRIWSLAHTAGANVIV
GPTHSEPRTASPGCLLGRGRRSVSGHCPEARPLASLRAPPIADSAFEDLPQATKIFRNST
FNLQSIQLSCASYPVLGETCQYSSGAEGFGRNVKPSQGAIDLSEGCVVQHKDKLRTAFRP
VLKR
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtccttctctcagtttggatatccctacagcaccacttcgcagttttttgtgtctgcc
agccccagtacgacttgttgtgaaactgcctccagagccgtgtcggatgtttcctcggga
tctgcccaagcggctactatttgctgtccctcttacgaaaacaggctgctggccagcacc
cggacggaactcaatgcagctctggggatgtacagctctccctattcagcagccgcagcg
agccagggttatgccaactaccttccttacggcacagacccatcaactctctacaccaca
ctgaaccctcagtatgaaattaaggatggcaccagcagtttgcactcgggattcgcacag
cctgctgctttctacccctacgatcattccttagggcagtaccagtacgacaggtatggg
acagtggatttcagtggctcagccaggcgcaaaaatgcaactcgcgagacaaccagcacc
cttaagacctggctgtacgaacacagaaaaaacccttatcccaccaaaggggagaaaatc
atgctggccatcatcaccaaaatgactctgactcaagtgtccacttggtttgctaacgcc
agacggaggctcaagaaggaaaacaaaatgacctggtctcccaagaacaaagcaggagaa
gagagaaaagatgaaaacaagagggaggaagaggaatatggcaccgaaaatgaaagcaaa
gcaggtcaaaaaagcttcaaggaagaaaaggaattgagactgagcgacctggacgattta
gacgaggaggaagaagacaagctagagaacgaccgaacgagtgcacacctggcggcttcc
agtgccagctctgctttggcggagtctgagaaaagggactgcagcgtgaccccacccagc
aattttcaccctctcccctgtaacaaagccatgccggtggcaggaggagactttttagag
accgtggggcaaaaggcagccagtggggcgggcaccgttagtcaagggcagcaatacgaa
cccacagacaagcccagaatctggtcgttagctcacaccgcaggggccaatgttatagtt
ggccccacacactccgaaccaaggacagcgagccctggctgtttgctcggccggggaagg
cgctctgtgtctggacactgccccgaggccagacccctggccagtctcagagccccgccc
attgcggacagtgcgttcgaagacctgccccaggccaccaagatttttagaaactccacc
ttcaacctgcagtctatccaactaagctgtgcttcctatcccgtcctgggggagacgtgc
cagtattcttcaggagctgaagggtttgggagaaatgtgaaacccagccaaggagccata
gatctcagtgaaggttgtgtagtgcagcataaagataaactgagaacagcttttaggcca
gtgctgaagaggtga
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integrated database retrieval system
