Trachemys scripta elegans (red-eared slider): 117886790
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Entry
117886790 CDS
T07347
Symbol
MAP1LC3B
Name
(RefSeq) microtubule-associated proteins 1A/1B light chain 3B
KO
K10435
microtubule-associated protein 1 light chain
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04137
Mitophagy - animal
tst04140
Autophagy - animal
tst04216
Ferroptosis
tst04371
Apelin signaling pathway
tst04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
117886790 (MAP1LC3B)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117886790 (MAP1LC3B)
04137 Mitophagy - animal
117886790 (MAP1LC3B)
09143 Cell growth and death
04216 Ferroptosis
117886790 (MAP1LC3B)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117886790 (MAP1LC3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117886790 (MAP1LC3B)
03029 Mitochondrial biogenesis [BR:
tst03029
]
117886790 (MAP1LC3B)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tst04812
]
117886790 (MAP1LC3B)
Membrane trafficking [BR:
tst04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
117886790 (MAP1LC3B)
Mitochondrial biogenesis [BR:
tst03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
117886790 (MAP1LC3B)
Cytoskeleton proteins [BR:
tst04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
117886790 (MAP1LC3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG8
APG12
Motif
Other DBs
NCBI-GeneID:
117886790
NCBI-ProteinID:
XP_034644724
LinkDB
All DBs
Position
13:complement(7258413..7267909)
Genome browser
AA seq
125 aa
AA seq
DB search
MPSEKSFKQRRTFEQRVEDVRLIRDQHPTKIPVIIERYKGEKQLPVLDKTKFLVPDHVNM
SELIKIIRRRLQLNSTQAFFLLVNGHSMVSVSTPISEVYESEKDEDGFLYMVYASQETFG
VQSSV
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atgccctccgagaagagcttcaagcagcgccgcaccttcgagcaaagagtagaagatgtg
cgactgattcgagatcaacatccaacaaaaataccagtgataattgaaaggtacaagggt
gagaagcagcttccagttctggataaaactaagttcctggtaccagatcatgtcaacatg
agcgaactaatcaaaattatcagacgccgcctgcagctgaattccactcaggctttcttc
ttactggtgaatggacacagcatggtgagcgtgtcaacccccatatcagaggtgtatgaa
agcgaaaaggatgaagatggattcctgtacatggtatatgcctctcaggaaacttttgga
gtccaatcttctgtgtaa
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integrated database retrieval system
