Trachemys scripta elegans (red-eared slider): 117886806
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Entry
117886806 CDS
T07347
Symbol
VANGL1
Name
(RefSeq) vang-like protein 1 isoform X1
KO
K04510
vang-like
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
117886806 (VANGL1)
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Gene cluster
GFIT
Motif
Pfam:
Strabismus
CDT1_C
Motif
Other DBs
NCBI-GeneID:
117886806
NCBI-ProteinID:
XP_034644751
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Position
1:complement(145501923..145566778)
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AA seq
535 aa
AA seq
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MDTESTYSGYSHYSGHSKKAHRQGSRDRHKSPRSKDGSRSEKSVTIQTPPAEPLLGNDAS
RTEEGQDDNWGETTTAITGTSEHSISQEDIARISKDLEDSVGLDCKRYLGLTVAAVLGLL
VFLTPIAFILLPQILWRDELEPCGTVCEGLFISVAFKLLILLIGTWALFFRQPKADIPRV
FVFRALLLVLIFLFVFSYWLFYGVRILDSKDTNYQGIVQYAVSLVDALLFIHYLAIVLLE
LRQLQPMFTVKVVRSTDGESRYYSLGHLSIQRAALVVLENYYRDFTIYNPSLLMASKSRA
AKHMAGLKVYNVDAALVAKLKMYIADGPGNNAAGQSRAMIAAAARRRDSSHNELYYEEAD
HDRRVKKRRARLVVAVEEAFTHIKRLQAEEQQKAPGEVMDPREAAQAIFPSMARALQKYL
RTTRQQHYHSMESILQHLSFCITNNMTPKAFLERYINPGPTLQYDRDRWFSKQWTLVSEE
AVTSALRDGVVFVLKCLDFSLVINVKKIPFIKLSEEFIDPKSHKFVLRLQSETSV
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggataccgaatcgacatattcgggatattcccactactcaggtcactccaaaaaagcc
cacagacaagggagtcgggacaggcacaaatcgccacggagtaaagatggcagtaggtca
gagaaatcggtcaccatccagacgcctcccgcggaaccgctgctggggaatgatgcctct
cggacagaagagggtcaggatgacaattggggtgagaccacaacagctatcacaggcacc
tcggagcacagcatctcccaggaggacattgccaggatcagtaaggatctggaggacagt
gttggcttggattgcaaacgctaccttggtttaacagtggctgctgtccttggactcctc
gtcttccttacccccattgccttcattctcttaccccagatcctgtggcgggatgaactg
gagccatgtggcaccgtctgtgagggactgttcatctctgtggcttttaaactcctgatt
cttctgattgggacctgggctctgttcttccgtcagccgaaggcggatataccaagagtg
ttcgtgttccgggccctcctgttggtccttatattcctgtttgttttttcctactggctc
ttctatggcgtccgcatcttggactccaaggacaccaattaccaggggatagtgcagtat
gcagtgtctctcgtagatgctctcctcttcattcactatctagccattgtgctgctggag
ctgaggcaactgcagcccatgttcacggtcaaggtggtgcggtcgacagatggagagtcg
cgatattatagcttggggcacctgagcatccagcgagctgcattggtggttctggaaaac
tactacagagatttcaccatctataacccaagcttgctaatggcctccaagtctcgcgca
gccaaacacatggctggcctgaaagtctacaatgtggatgctgcccttgtagccaaactg
aaaatgtatatagcggatggcccaggtaacaatgctgccggccagtcccgggccatgatc
gctgctgccgcccggcgcagagactccagtcacaacgagctttactatgaagaagcagac
cacgatcgcagagttaaaaaacgtcgagcaaggcttgtggttgcagtggaagaggctttc
actcacattaaacgtctccaggcagaggaacagcagaaagctccaggtgaagtgatggat
ccccgtgaggcagcccaggcaattttcccatccatggcgagggctctgcagaaatacctt
cgcaccacccggcagcagcactaccacagcatggagagcatcctgcagcacctgtccttc
tgcatcaccaacaacatgacgcccaaggcattcctggagcgttacatcaatccaggccca
accctccaatatgacagagatcgctggttctccaagcagtggacgctcgtcagtgaagaa
gcagtcacaagtgcattaagggatggtgtcgtttttgttctcaagtgcttggacttcagc
cttgtaattaatgtgaagaaaatccccttcatcaaactctcggaagagttcatagatccc
aaatctcacaaatttgtccttcgcttgcagtctgagacttcggtttag
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