Trachemys scripta elegans (red-eared slider): 117886906
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Entry
117886906 CDS
T07347
Symbol
TRIM41
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM41 isoform X1
KO
K12017
tripartite motif-containing protein 41 [EC:
2.3.2.27
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117886906 (TRIM41)
Enzymes [BR:
tst01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117886906 (TRIM41)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117886906 (TRIM41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_2
zf-C3HC4_3
Nop14
zf-RING_6
zf-RING_5
DUF1664
Motif
Other DBs
NCBI-GeneID:
117886906
NCBI-ProteinID:
XP_034644930
LinkDB
All DBs
Position
14:35784782..35797721
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AA seq
714 aa
AA seq
DB search
MAVAGEGGSMGGAGGRPNAVETLQEEAVCAICLDYFTDPVSIGCGHNFCRVCITQLWGGE
EEGEGQAEYEAVGDDVGMGGEEDDVDEVDDDDNVEYNEEEEEGDGDDLAEEEDDMWSEED
EDTDLWDDPGEDDMWEDEVGDELFFEEDDYDEEVMEEEDLEEEEEEPLPPPPPAAVATRP
RHPPTFTCPQCRKTFPQRNFRPNLQLANMVHIIRQMHPHPQRLASPAAGTSASGRSGSAA
GVAGGLEKRALCEKHQEPLKLFCEVDEHAICVVCRESRSHKHHSVVPLEEVVQDYKMKLQ
GHLDPLKKKLDAVLKQKSSEEEKITELKNKMKLEIKEFESDFELLHQFLIGEQVLLLHQL
EERYEALLARQSSNISQLEEQGATLGRLIAEAEDKSRQDGLQLLKDIKDTFIRCESVKFQ
EPETVPVDVGKKYRNYFLQDVVMRKMEKVFRKVPQADVTLDPDTAHPHLSLSLDRRSVKL
GDRRQDLPDNPKRFDSDYCVLGSQGFSTGRHYWEVEVGGRRGWAVGAARETARRKEKTGG
PYQKREIWCVGANGKKYQALTATEQTALPPGEKLRRFGVYLDYERGTRLHCSLPSPIMLP
SLPCWCSDQDPALQKHCFPPPLVSSLQSPVLSTQNHPSVHLSSSSSPQQSSCLPVLVPRS
SPEPSGTRSSPEPSRVLLNLSSTLSPPFVALDIAFIRGRPKQPVVLRQMGQLPP
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggcagtagctggggaaggcggctccatggggggcgcgggcgggcggcccaacgcggtg
gagacactgcaggaggaggccgtctgtgccatctgcctcgactacttcaccgaccccgtc
tccatcggctgtggccacaacttctgccgcgtctgcatcactcagctctggggaggcgag
gaagagggcgagggccaagccgagtacgaggctgtgggggacgatgtggggatgggtggc
gaggaggatgacgtggatgaggtggatgatgatgacaacgtagagtacaacgaggaggaa
gaggagggggacggggatgacttggctgaggaggaagacgatatgtggagcgaggaagac
gaggacaccgacctgtgggacgacccaggggaggatgacatgtgggaggacgaggtggga
gatgagctcttcttcgaggaggacgattacgatgaggaggtgatggaggaggaggacctg
gaggaggaggaagaagagccgctgccaccgcctcccccagcagcagtggccacgcgacct
cgacaccccccaactttcacctgcccccagtgccgcaagaccttcccccagaggaacttc
cggcccaacctccagctggccaatatggtgcacatcatccgacagatgcacccacatccc
cagcgactcgcatcaccggccgctgggacctcggcatctgggaggtctgggagtgcggca
ggagtggcaggggggctggagaaaagagccctgtgtgagaaacaccaggaacccctcaag
ctcttctgtgaggtggacgagcatgccatctgtgtggtgtgccgggagtcccggagccac
aagcaccacagcgttgtcccactggaggaggtggtgcaggattacaagatgaaactccag
ggccacctggatccgctgaagaagaagctggatgcggttctgaaacagaaatcaagcgaa
gaggagaaaattactgagctgaagaacaagatgaagctggagatcaaggagttcgagtcg
gacttcgagctgctgcaccagttcctgatcggggagcaggtgctgctgctgcaccagctg
gaggagcgctacgaggcgctgctggcccgccagagcagcaacatcagccagttggaggag
cagggcgccaccctcgggcgcctcatcgctgaggctgaggacaagagcaggcaggacggg
ctgcagctgctcaaggacatcaaagacaccttcatcaggtgcgagagcgtcaaattccag
gagccggagaccgtgccggtagacgtggggaagaaataccgcaattacttcctgcaggac
gtggtgatgaggaagatggagaaggtcttcaggaaagtccctcaagctgacgtgaccctg
gaccccgacacggcccaccctcacctgagcctgtccctggatcgccggagcgtgaagctg
ggcgaccgtcgccaggacctacccgacaaccccaagcgcttcgactccgactactgcgtg
ctgggttctcagggcttcagcacggggcgccactactgggaggtggaggtggggggccgg
cggggctgggcagtgggggcagcccgggagacggcccggcggaaggagaagacgggtggc
ccctaccagaagcgggagatctggtgcgtgggtgccaacgggaaaaagtaccaggcgctg
acggccacggagcagacagcgctgccccctggggagaagctccggcgctttggggtctac
ctggactacgagcggggcacaagactccattgctctctgcccagtccgataatgctgcct
tcccttccctgctggtgttcagaccaagatccagccctgcaaaaacattgcttccccccg
ccccttgtgtccagcctccagagcccagtgctttccacccagaaccatcccagtgtccat
ctgtcctctagttcttccccacaacagtcctcttgtctgccggtcttggtccccaggtct
tctccagaaccatcaggcaccaggtcttctccagaaccatcacgcgtgctcctgaatctc
tcttccacattgtcaccacccttcgtggccctggacattgcatttattcgtggacgtcca
aaacagcctgtggtactgaggcaaatggggcaacttcctccctaa
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