Trachemys scripta elegans (red-eared slider): 117886962
Help
Entry
117886962 CDS
T07347
Name
(RefSeq) zinc finger protein RFP-like
KO
K12000
tripartite motif-containing protein 7
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117886962
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117886962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
Laminin_N
zf-RING_6
zf-RING_5
U-box
Sina_RING
zf-Nse
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
117886962
NCBI-ProteinID:
XP_034645044
LinkDB
All DBs
Position
14:complement(39970959..39979382)
Genome browser
AA seq
479 aa
AA seq
DB search
MAAADPAKTFEDEASCPICLEYFNDPVTLDCGHNFCRACITQCWAGLDTDVFCPCCMEIF
PQRNFRANRQLGTLVDLIIGQLKDEQQQAKLGGETVCGKHQEALKLFCEEDQTPICVVCD
RSREHRAHTVVPIQEAAQEYKEQIWRRLDVLEKGREEILALIACEEEQSQELLRQIKIDR
ETMEYRFEKLHKFLKEQECLLLAWLDELEKEVTARKDENVCRLTEEVSRLNTLIGQMEEK
CKQPASEFMQDVRSTLSRCEMGTFQAPAPASPEPKWRLWLFSQNFAFLQDALRKLKVNLL
PEPKPDRAEVTLDPDTANPWLAVSADGKSVHWGVARQDLPDHPERFDPAPCVLASEGFAS
GRHCWEMEVGEGAVWVVGVALEPVKRKGASTFTPEQRIWAVRKYWEQHWALTCPETPLYL
HGVPRRIRIYVDYEGGLVAFYDAGNEAPIFTFPPAPFGGEKICPFFELLSTGSQIKLCP
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgccgatccagcaaaaacttttgaggatgaagcttcttgtcccatctgcctg
gagtattttaatgatccggtgactctagactgcgggcacaatttctgccgagcctgcatc
acccagtgctgggcgggattggatacagatgtgttctgcccctgctgcatggagatcttt
ccccagaggaacttccgagccaacagacagctggggactctcgtagacctaatcatcgga
cagctgaaggatgagcaacaacaggccaagctgggaggggagacggtgtgcgggaaacac
caggaggctctgaaattgttctgcgaggaggatcaaacccccatctgtgtggtgtgcgac
agatccagggagcatagggctcacactgtagttcccattcaagaggctgcccaggagtac
aaggagcaaatctggaggcggctggatgttctggagaaggggagagaagagattctggct
ctcatagcgtgtgaggaagagcaaagccaggaactgctgagacaaataaaaattgacagg
gagacgatggagtatcgatttgagaaactgcacaagtttctgaaagaacaagagtgcctc
ttgctggcctggctggacgagctggagaaagaggtcaccgccagaaaggatgaaaacgtc
tgccgactcaccgaggaggtttcccgtctcaacaccctgatcgggcagatggaggagaag
tgcaagcagcccgcgagtgaattcatgcaggatgtcagaagcactttgagcagatgtgag
atgggcacattccaggctccagcgcctgcttctcctgaaccgaaatggagactctggttg
ttttctcaaaatttcgctttcctccaggatgctctgaggaagctgaaagtgaatctgttg
cctgaaccgaaaccggacagagctgaagtgactctggatccagacacggcaaatccctgg
ctcgccgtgtccgcggatggcaaaagtgtgcactggggagtcgcccggcaggatctgccc
gaccatcccgagagatttgaccctgctccctgcgtgctggcctctgagggctttgcctct
gggaggcattgctgggagatggaagttggagaaggggcagtctgggtcgtgggagtagcc
ctggaacctgttaagaggaaaggagcgagcacgtttacaccagagcagaggatctgggcc
gtgcggaaatactgggaacagcattgggcgctcacctgccctgaaactcctttgtatcta
catggggtccctaggaggatccggatttatgtggactatgaagggggattggtggcgttt
tatgatgctggcaacgaggccccgatcttcactttcccaccagccccttttggtggcgag
aaaatctgccctttctttgagctgctgagtacaggctcccagatcaaactgtgcccctga
DBGET
integrated database retrieval system
