Trachemys scripta elegans (red-eared slider): 117887052
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Entry
117887052 CDS
T07347
Symbol
U2AF2
Name
(RefSeq) splicing factor U2AF 65 kDa subunit isoform X1
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117887052 (U2AF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tst03041
]
117887052 (U2AF2)
Spliceosome [BR:
tst03041
]
Complex A
U2 snRNP components
U2 related factors
117887052 (U2AF2)
Complex B
117887052 (U2AF2)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
117887052
NCBI-ProteinID:
XP_034645177
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All DBs
Position
14:40829797..40843525
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AA seq
558 aa
AA seq
DB search
MQCGMAGAGVSAGCTSEMEGALHAGSWSPAHAALGKLAPVISTGPAAEPGKAQAPVWGDE
QLGDGTPRIGGRARASPANPPALPLPPAERDKENRHRKRSHSRSRSRERKRRSRSRERRN
RDQRSVSRDRRRRRKNQELTTTATTQVCVGRSPLNLAGPLSRSPRHEKKKKIRKYWDVPP
PGFEHITPMQYKAMQAAGQIPATALLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNI
PFGITEEAMMDFFNAQMRLGGLTQAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDG
IIFQGQSLKIRRPHDYQPLPGMSENPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVK
ELLTSFGPLKAFNLVKDSATGLSKGYAFCEYVDINVTDQISKAIAGLNGMQLGDKKLLVQ
RASVGAKNATLSTINQTPVTLQVPGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEE
IVEDVRDECSKYGVVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANR
VVVTKYCDPDSYHRRDFW
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgtggcatggctggagctggagtctctgctggctgcacctctgagatggagggg
gcgttgcatgctgggagctggagtcccgcacatgctgcattaggcaaactagcgcctgtt
atttcaactggacccgcagcggagccaggcaaggcccaggcccccgtgtggggagatgag
cagctgggggatgggacgccaagaattgggggcagggcccgtgcgtcccccgctaacccg
cccgccctccccctcccccccgcagagcgcgacaaggagaaccgtcaccggaagcgcagc
catagccgctcgcggagtcgcgaacggaagcgccgcagccggagccgggagaggcgcaac
agagaccagcgcagcgtctcgcgggaccgcaggcgacgcaggaagaaccaagaattaaca
acaacagcaacaacacaagtatgtgttgggaggtcacccctaaatcttgctggtcccttg
agccgctccccccgccatgagaagaagaagaagatccgcaagtactgggacgtgcccccg
cccgggtttgagcacatcacccccatgcagtacaaagccatgcaagccgcgggtcagatt
ccagccacagctctcctcccaaccatgacccctgatggattggccgtgacccccaccccg
gtcccggtggtcggcagccagatgacccgacaggcccgccgcctctacgttggaaatatc
cccttcggcatcactgaggaggccatgatggatttctttaacgctcagatgcgccttgga
gggctgacccaggcccctggcaaccccgttttggctgtgcagatcaatcaggacaagaat
tttgctttcctggagttccgctctgtggacgagaccacccaggccatggcattcgacggc
atcatcttccaggggcagtcgctgaagatccgccgcccccatgattatcagccgctgccc
ggcatgtctgagaacccatctgtctacgtgccaggcgtggtgtccaccgtggtcccggac
tcggctcacaagctcttcatcgggggtttgcctaactacctaaacgacgatcaggtgaag
gagctgctgacttctttcgggcccctgaaggccttcaacctggtgaaggacagcgccacc
gggctgtccaagggctacgccttctgcgagtacgtggacatcaacgtcacagaccagatt
tcgaaggccatcgccgggctgaacggcatgcaactgggtgacaagaaactgctggtgcag
agagccagcgtcggagccaagaacgccacgctgagcacgataaaccagaccccggtgacg
ctgcaggtgcccgggctgatgagctcgcaggtgcagatgggcgggcaccccaccgaggtg
ctctgcctcatgaacatggtgctgcccgaggagctgctcgacgatgaggagtacgaggag
atcgtggaggacgtgcgggacgagtgcagcaagtacggggtggtcaagtccatcgagatc
ccccggcccgtcgacggcgtcgaggtgcccggctgtggcaagatcttcgtggagttcacc
tcggtcttcgactgccagaaggccatgcagggcctcaccggccgcaagttcgccaacaga
gtggtggtcaccaagtactgcgaccccgactcctaccaccgccgcgacttctggtag
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