Trachemys scripta elegans (red-eared slider): 117887248
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Entry
117887248 CDS
T07347
Symbol
HGS
Name
(RefSeq) hepatocyte growth factor-regulated tyrosine kinase substrate isoform X1
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03250
Viral life cycle - HIV-1
tst04144
Endocytosis
tst04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117887248 (HGS)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117887248 (HGS)
04145 Phagocytosis
117887248 (HGS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117887248 (HGS)
Membrane trafficking [BR:
tst04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
117887248 (HGS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
Hrs_helical
FYVE
FYVE_2
UIM
FYVE_CARP1-2
Motif
Other DBs
NCBI-GeneID:
117887248
NCBI-ProteinID:
XP_034645501
LinkDB
All DBs
Position
14:<34506007..34517618
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AA seq
759 aa
AA seq
DB search
MGRGGGTFERLLDKATSQLLLETDWESILQICDMIRQGDTQAKYAVGAIKKKVNDKNPHV
ALYALEVMESVVKNCGQTVHDEVANKQTMEELKELFKRQVEVNVRNKILYLIQAWAHAFR
NEPKYKVVQDTYQIMKVEGHVFPEFKESDAMFAAERAPDWVDAEECHRCRVQFGVVTRKH
HCRACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCYEHLNKKAEGKTAATTELPPEYLTS
PLSQQSQLPPKRDETALQEEEELQLAIALSQSEAEEKERMRQKTTYSVYPKAEPTPVTSS
APPVSTLYSSPVNSSAPLAEDIDPELARYLNRNYWEKKQEEVRKSPTPSAPLSLSEPAAQ
PGEAHPIPLGVVEQQYQNGESEENHEQFLKALQNAVTTFVNRMKSNHMRGRSITNDSAVL
SLFQSINNMHPQLLELLNQLDERRLYYEGLQDKLAQIRDARGALNALRDEHREKLRRAAE
EAERQRQIQLAQKLEIMRQKKQEYLEMQRQLAIQRLQEQEKERQMRLEQQKQTIQMRAQM
PAFSLPYAQLQAMPAAGGVIYQPSGPTSFPGTFSPAGSVEGSPMHSVYMNQPAPGSTGPY
APMPVAGADPNMVNAYVYQAGAGGGQAAPQGQVVPTTNPAYSSYQPTPTQGYQNAASQSQ
SIPAISQAPQSGTMGYMGSQSVSMGYQPYNMQGLMSTLPGQEPALSSLPPQQTYLSGQQP
MYQQMPPPAGPPQQQQPQQAPSQVQQAQGSGEAQLISFD
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgggcagaggcggcggcaccttcgagcggctcctagataaagctaccagtcagcttctg
ctggagacagactgggaatccatcctgcagatctgtgatatgattcgtcagggagacact
caagctaaatatgcagtcggtgctatcaagaagaaagtcaatgacaagaacccccatgtg
gctctctacgcactagaggtcatggagtctgtggtcaagaattgtggccagacagtccat
gatgaggtggccaataaacagactatggaggagctgaaggaactattcaagagacaagtg
gaagtgaacgttcgcaataagatcttgtacctgatccaggcctgggctcacgccttccgc
aacgagcccaagtacaaggtggtgcaggacacctaccagatcatgaaggtggaaggtcat
gtgttcccagaattcaaggagagcgatgccatgtttgctgcagaaagggctcctgactgg
gtggatgctgaagagtgtcaccgatgtcgagtgcagtttggggtcgtgacccgcaagcat
cactgccgggcctgtgggcagatcttctgtggaaagtgctcctccaagtactccaccatc
cccaagtttggcattgagaaggaggtgcgggtgtgtgagccctgctacgagcacctcaac
aagaaagctgagggcaaaactgctgccaccactgagctgccgcccgagtacctgaccagc
cccctttctcagcagtcccagctgcccccgaagcgtgacgagacggccctccaggaggag
gaggagctccagctggccatcgccctctcgcagtcggaggccgaggagaaggaaaggatg
agacagaaaacgacctactccgtgtacccgaaggctgagcccacgcctgtcacctcgtcc
gcacccccagtcagcaccctctactcctcccctgtgaactcctctgctccgctggctgag
gacatcgaccccgagctggctcggtacctgaaccgtaactactgggagaagaagcaggag
gaggttcgcaagagccccaccccgtctgctccactgtcgctctccgagccagctgcccag
cctggggaagctcatcccatcccgctcggtgtcgtggagcagcagtaccagaatggggag
tccgaggagaaccacgagcagtttctgaaggctctgcagaatgccgtcaccaccttcgtc
aaccgtatgaagagcaaccacatgcggggccgcagcatcaccaacgactcagccgtgctc
tccctcttccagtccatcaacaacatgcatccccagctgctggagttgctcaaccagctg
gatgagcgcaggctgtactatgagggcctgcaggacaagctggcgcagatccgggatgct
cgcggggccctgaatgctctgcgggacgagcaccgcgagaagctgcgccgggcggccgag
gaggcagagcgccagcgccaaatccagctggcacagaagttggagatcatgagacagaag
aagcaggagtacctggagatgcagcggcagttggccatccagcggctgcaggagcaggaa
aaggagaggcagatgcgcctggagcagcaaaagcagaccatccagatgagagcccagatg
cctgctttctctctgccctacgcccagctccaggccatgccagcagcaggaggggtgatc
taccagccatccggtcccaccagcttcccaggcaccttcagccccgcaggctcggtggag
ggctctcccatgcacagtgtgtacatgaaccagccagctcccggcagcactggcccctac
gcaccgatgcctgtggcaggggcagatcccaacatggtgaatgcctacgtgtaccaggca
ggagcaggaggcgggcaggcagcgccgcaagggcaggtggttcccaccaccaacccagcc
tactcctcgtatcagccgactccgacgcagggctaccagaacgctgcctcccagtcacag
agcatccctgccatctcgcaggccccccagtctggcaccatgggctacatggggagccag
tctgtctccatggggtaccagccctacaacatgcagggcctcatgtcgacccttcctggg
caggagccggctctgagcagcctgccaccccagcagacttacctctcgggacagcagccc
atgtatcagcagatgcctccccctgcagggcccccccagcagcagcagcctcagcaggcc
ccgtcgcaggtacagcaggcccagggcagtggcgaggcccagctcatctcattcgactga
DBGET
integrated database retrieval system
