Trachemys scripta elegans (red-eared slider): 117887286
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Entry
117887286 CDS
T07347
Symbol
TRIM25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117887286 (TRIM25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117887286 (TRIM25)
Enzymes [BR:
tst01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117887286 (TRIM25)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117887286 (TRIM25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
Motif
Other DBs
NCBI-GeneID:
117887286
NCBI-ProteinID:
XP_034645600
LinkDB
All DBs
Position
14:complement(25610286..25628512)
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AA seq
396 aa
AA seq
DB search
MDLLRSEFLEIKALIEEEENQAMKKVEEEEKRVCDKFDYVHNVLGKKKNEIQVIRDQIEM
ALTEDDDITFLKNAAKLRHTSTKEVFIPRIDLDQNLIHTIYQGAFSLKEIVKRTVNQPQE
KKVEAGGQSRPSVEEKTNLQWKPKAFQINPSNKLSASGRKAAGSQAAKIGKAPQKPQPEL
SEDADTRDKRKPAKSAPNTANPGATSLESFLTKSREELLEYAVKITLDFNTAHNKVLLSD
RNTKMSVSEIPQKYSPHPQRFTYCSQVLGFQCFKRGIHYWEVELQRNNFCGIGICYGSMD
RQGADSRLGRNSSSWCIEWFNSKISAWHNDLEKCLPNTKATKIGVLLNYEGGFVIFLGIG
EKHNLIYKFKAQFTEALYPAFWVFSSGTMLSLCQLK
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggatttgctcagaagtgagttcttggaaattaaagctttaatagaagaagaagaaaac
caggcaatgaagaaggttgaagaagaggaaaagcgagtctgtgataagtttgattatgtc
cataacgtcctgggaaagaagaaaaatgaaattcaggtcatcagggaccagattgaaatg
gcactgactgaagatgatgatattacatttttaaagaatgcagcgaaattgcgacacact
tcaaccaaagaagttttcatccccagaattgatctggaccaaaacttgatacacaccatt
tatcaaggtgccttttcccttaaagaaatagtgaaacgaacggtgaatcaacctcaggag
aagaaagtggaagcaggcggacagtccagaccaagtgtggaagagaagacaaatctacag
tggaaacctaaggcttttcaaataaacccttcaaataaactctcggcatctggaagaaaa
gctgctggatcacaagctgcaaaaataggtaaagcccctcagaagcctcagccggagttg
agtgaggatgcagacaccagggataaaagaaaacctgccaaatctgcaccaaacactgcg
aatccaggcgcaacatctcttgaaagctttttaacgaaatcgagagaggagctcctggag
tatgctgttaaaatcacgctggatttcaacaccgctcataacaaagtgctgttatcagac
agaaacaccaagatgtcggtctctgaaataccccagaagtatagcccccaccctcagcgc
ttcacctactgttcccaagtgctgggcttccagtgcttcaagaggggcatccactactgg
gaagtggaattgcaacggaacaacttctgcggcatcggcatctgctacgggagcatggac
aggcaaggggcggacagccgcctggggcggaacagcagctcctggtgcattgagtggttt
aattcgaaaatttcagcctggcataatgatcttgaaaaatgtctgcccaacaccaaggcc
accaagattggggtgctgctcaattatgagggaggattcgttattttcctgggtattggc
gagaaacataacttgatctacaaatttaaagcacagttcactgaagcgctgtatcctgct
ttctgggtgttttccagtggcactatgctttcgctctgccagctgaaatag
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