Trachemys scripta elegans (red-eared slider): 117887293
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Entry
117887293 CDS
T07347
Symbol
PECAM1
Name
(RefSeq) platelet endothelial cell adhesion molecule isoform X1
KO
K06471
platelet/endothelial cell adhesion molecule
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04148
Efferocytosis
tst04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117887293 (PECAM1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117887293 (PECAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tst04090
]
117887293 (PECAM1)
00536 Glycosaminoglycan binding proteins [BR:
tst00536
]
117887293 (PECAM1)
04091 Lectins [BR:
tst04091
]
117887293 (PECAM1)
CD molecules [BR:
tst04090
]
Proteins
117887293 (PECAM1)
Glycosaminoglycan binding proteins [BR:
tst00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
117887293 (PECAM1)
Lectins [BR:
tst04091
]
I-type lectins (Siglecs)
117887293 (PECAM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
I-set
Ig_C17orf99
V-set
Zwei_Ig_N
VEGFR1-3_N_Ig-like
DUF2198
Motif
Other DBs
NCBI-GeneID:
117887293
NCBI-ProteinID:
XP_034645626
LinkDB
All DBs
Position
14:complement(26862023..26911941)
Genome browser
AA seq
735 aa
AA seq
DB search
MYFAVLVILLHCPSLKAQDDVITINKVELTAPSLKVKNGMSIELTCIVDISKSTSFQMQH
AFLFYKDDSLLHNTTSEQNRTRYKISPARFADSGSYKCTVEANRKTKSSNDLDVQVEGLS
QPKLTALKREVTEGEVVTLRCEVPEEKPPFIFLFRKLLPDQQFQEKRKQELKENFASVEF
PVEEGDRILRFQCIAKVTSAVYSETSDPSNMTIVTVVEPFSHPKLTSKSPWNITEGDRID
IVCTTILVRKYELEILIQKDSRILNSTRGQSSVTYSAIATVEHNGNYTCKVELGRVSKTT
SMNIVVAELFAKPILTPSLTDLDENARLSLWCHINGSPKANFSIIKRPPENGILLKTFSN
FTIRAQVNDTGSYVCRAEIKGIIKESNPVQITVYAPVSEPVLSVASPSTEMVLGETLLLR
CQSMSGTPPINYTLFRENRLIHTITVFNNTYAEFRDRQTKLNNLREYRCEASNRHSNAKR
SSYKMNITVIAPVRNVSFGSLPQGEVEDGGEINFLCIVGEGSLPINFRIFKQNDQKPLFN
ESRMETRLLWQKKTFHKQDAGKYFCDASNRVTEPMRSNLLTVKVILASWQKGFIALFVLA
VIAITASGFWWYWRKKEKGKHPSMEMSGSTAATNSTSEKLPSGPNHYTEFYPGSGYIEDE
NPVKPTDENKGPDHESAEVEYTEVEVSTPDPYKAPVKKGTDTVYSEIRKANNDSGENRHS
LFSPSSLPIENRRFS
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtatttcgctgtgctggtgattctcttacactgtccaagtctaaaagctcaagacgat
gttattaccatcaacaaagttgaactcactgcgccatccctgaaagtgaagaatggaatg
tcaattgaactcacctgtattgtggacattagcaaaagcaccagcttccagatgcagcat
gcttttttattttacaaggatgacagtcttctgcataataccacgtcggagcaaaacaga
acacgttacaaaatatcgccagctcgatttgcagattcgggaagctacaagtgcactgtg
gaggcaaacaggaagactaaaagcagcaatgatttggatgttcaagttgaggggctgtcc
cagccaaaactgactgccctgaaaagagaagtaacggagggtgaagttgtgactttacgg
tgtgaagtaccagaagaaaagcctcccttcattttcttgttccgtaaactattgcccgat
caacagttccaagagaaaaggaagcaagaattaaaagaaaactttgcatctgttgagttt
cctgttgaagagggggatcgaatattgcgttttcaatgtattgccaaggttacttcagca
gtctattctgaaacatcagaccccagtaacatgacaattgttacagttgtggaaccgttt
tcacatcctaaactgacatccaagtccccatggaacattacagaaggagacagaattgac
attgtgtgcacaacgattctagtccggaaatatgaacttgaaatcctcatccagaaagac
agcaggatactaaacagtacacgaggtcagagttctgtgacctactctgcaatagccaca
gtggagcacaatggcaattacacgtgcaaagtggaactggggagagtgtccaaaaccacc
agcatgaacattgttgtggcagagttgtttgccaagccaatattgactccttctttgact
gacctggatgaaaatgcgaggttaagcctgtggtgccatattaatggctcccctaaagca
aacttctctatcataaagagacctccggagaacggcatcttgttgaaaactttcagcaac
ttcactattcgagcccaggtgaatgacactgggtcctatgtttgtagggctgagataaaa
ggaatcatcaaggagagtaaccctgtacagataactgtttacgctccagtctcggagcca
gttctttctgttgccagcccatccacggagatggtgttaggggagaccctactcctacgc
tgtcaatccatgtctggaactccacctataaactatacgctcttcagagaaaacagactt
attcacaccatcacagtatttaataatacatatgctgaattcagggacagacaaactaaa
ttaaataatctgagagaatacagatgcgaagctagcaaccgtcactccaatgcgaagaga
agtagctataagatgaacatcacggtgatagctcccgtgcgcaacgtaagctttggaagt
ttaccccagggggaagtggaagatggtggagaaatcaactttctttgcatcgtaggcgaa
ggatctttgccaatcaacttcagaatttttaaacaaaatgaccagaaacctttatttaat
gaaagcagaatggaaaccagactcctctggcagaagaaaacatttcataagcaggacgca
gggaaatatttttgcgacgcctccaaccgagtcacggaacctatgcgaagcaacttgcta
accgttaaagtcatcctggcttcatggcagaaagggtttatcgcattatttgtcttggct
gtaattgccataacagcttctggtttctggtggtactggcgtaagaaggaaaagggtaaa
catccttccatggagatgtctggatccacagcagccactaattcgactagtgagaaactg
ccatctggaccgaaccattatacagaattctatcctggatcaggttacattgaagatgaa
aatcctgtaaaaccaacagatgaaaataaaggacctgaccatgagagtgctgaggtggaa
tatactgaagttgaagtgtcaacgcctgatccttacaaagctcctgtaaagaaggggaca
gatacagtatatagtgaaatcagaaaagctaataatgattctggggaaaacagacactct
cttttttccccctcctcattgccaatagagaatagaaggttctcctga
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integrated database retrieval system
