Trachemys scripta elegans (red-eared slider): 117887394
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Entry
117887394 CDS
T07347
Symbol
FAAP100
Name
(RefSeq) Fanconi anemia core complex-associated protein 100 isoform X1
KO
K10993
fanconi anemia core complex 100 kDa subunit
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
117887394 (FAAP100)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tst03400
]
117887394 (FAAP100)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
117887394 (FAAP100)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCAA
Motif
Other DBs
NCBI-GeneID:
117887394
NCBI-ProteinID:
XP_034645863
LinkDB
All DBs
Position
14:32320709..32336236
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AA seq
885 aa
AA seq
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MAHVGHKVDYLAGFCCPVGGLAAGKPRVLCHENQVYLSNGSEFVYVYDQEGKVLKAIYRF
PDQVWHVELLPLRRQLYILCAGNGIYCVSLDQQSRLMKQTDGDGTEDACPSSVFPVDPDA
CIVPDVTLCTFTLLNDVLVTLSQAQGQWWMKLHVLLDPDQESQPCRQISQVGFSTCDQTG
DDGDALSSHFLPVLCCASAPGTAGPGEGLWCSGGFTLEEPLFSLLFGIDAAMLDSPMILC
GFPDGQLCCVPLKALNSSDAVDACSEVAGQAPPVKILHHLEEPVVFIGALRTEHKAPDDP
DDQQLFGDSGCDCVVVVGHYGKMVAMKAERGEEAKVPEVREYYLQGPILCAACGGGSRMY
YSTHSDISAVDLDWVSNASDPESIANTAYVLPPVLSPASLSICSVVALSLSSRASEGDSE
LLALSAKGRLMSCDLCSPDDAHPIRLTPEKAGQRIKELLSGIGNASERVSFLKKAVDQKN
RALTSLNQVMNVSAALLSNQDGRKPVTCTVTASWSRLLLRDTWAISCVLENSSECSLEQG
WTLCVQLFTSSCAFDEDSVDSATTFTFPIDQLLPGSKREVTLPLGSAEGTKLELPLTVSC
ALFYSLREILDSASDSYESLDDLLPDDSPGLSPDKEGICLPLSKCTIDILQCLRLDDSTV
PGAPPSIATLSDPVETFLKVSRVQSDPSSVEVSDQLLPKALGDEYLPPSVASIKVSSELL
KNALKSFCEGAPLCCAALQWLLAENAEAAPLRSQDVSAVRGLAPRGGEVQLLVREVAVNN
LCPAGPIQAVEILMQSPSLAEMCRVHQAVIRRIQQTLVLEQASQGSGPPDLRMQYLCQIQ
ANHEMLLKDVQALRDRLCLGDDASATAEKLLHVYRQLRNPSLILL
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacgtgggccacaaggtggattacctggctgggttctgctgcccggtcgggggg
ctggctgcgggcaagccccgagtgctgtgtcacgagaaccaggtctacctgtccaacggc
agcgagttcgtctatgtgtacgaccaggaagggaaggtgctgaaggccatctataggttt
cccgatcaagtttggcacgtggaactcctcccccttcgtaggcagctctacatcctgtgt
gccggaaacggcatttactgtgtatccctggaccagcagagcaggttaatgaagcagact
gatggcgatggcacagaggacgcttgcccttccagcgtcttccccgttgaccccgatgcc
tgcatcgtcccagacgtcacgctgtgcaccttcacgctgctgaacgacgttctcgtcacc
ctctcccaggctcagggccagtggtggatgaaactccacgtgctcctggaccccgatcag
gagagccagccatgtcggcagatcagccaagtggggttctccacctgcgaccaaaccgga
gacgacggggatgcgctgtcctcgcacttccttcctgtcttgtgctgtgcgtccgcacca
ggcacagccgggcccggggagggtctgtggtgttcgggggggttcacgctggaggagccc
ctcttcagcctgctctttggcatagacgctgccatgctcgactctcccatgattctctgt
ggcttcccggacgggcagctgtgctgcgtgccgctgaaggccctcaattcttctgacgcc
gttgacgcctgcagtgaggttgcaggccaggctccgcctgtgaagatccttcaccatttg
gaagaacctgttgtcttcattggagccttgagaacagaacacaaagcccctgacgatccc
gatgaccagcagctgtttggagactcaggctgcgactgcgttgtggtggtcgggcactac
ggcaagatggtggccatgaaggcagagcggggagaagaggccaaggtcccagaggtcagg
gagtactacctgcaagggcccatcctgtgcgccgcctgtggtggcggcagccggatgtat
tacagcacacattcggacatctccgcggtcgacctggattgggtcagcaacgcttccgac
cccgagagcatagctaacactgcatacgtcctgcctcccgttctgtctccagccagttta
agtatctgtagcgttgtggcgctttccttgtcttctcgggcctcagaaggtgactcggag
ctgctggctctctctgctaaaggccgactcatgagctgtgacttatgtagtcctgatgac
gctcatcccatcaggctgaccccagaaaaagctggccaaaggataaaggaactgctgtct
gggataggcaatgcctcggagagagtttctttcctgaaaaaggccgtggaccagaagaac
cgagcgctgacgagcctgaaccaggtgatgaatgtgagtgctgccttactgtccaaccaa
gatggccggaagcccgtcacttgcactgttaccgccagctggagccgtctgctgctccga
gatacctgggccatctcctgcgtgttggagaactcgagcgaatgcagcctggagcaaggc
tggaccctctgcgttcagctgttcacgagctcctgtgccttcgacgaagactctgttgat
tcggccaccacgttcacctttccaatcgaccagctcctccctgggagcaagagggaggtg
acgttgccgcttggctcagccgaaggcaccaagttggagctgcctctgaccgtctcctgt
gctctcttctacagcctgcgagagattctggacagtgcgtcggactcctatgagtcactg
gacgacctgcttcctgatgactctcctggcctttccccagacaaagaagggatctgcctg
cccctgagcaaatgcaccatcgacatcttgcagtgccttcgtctggatgacagcacagtg
cctggagcccctccttccatcgccaccctgtcagacccggtggagaccttcctgaaagta
tccagggtgcagtctgaccccagcagcgtggaagtcagcgaccagctgcttcccaaggcc
ctaggagatgagtatctacccccatcagtggcttctatcaaggtgtcatcggagctgctg
aaaaatgcattgaagagcttctgtgaaggagccccgctctgctgcgctgctctgcagtgg
ctgttggcggagaacgctgaggccgcgccgctgaggagccaggatgtgtcggcagtgcgg
ggcctggccccacgtggaggcgaggtgcagctgctcgtccgagaggtggccgtgaacaat
ctctgcccagcgggccccatccaggccgtggagatcctgatgcagagcccttctctggca
gagatgtgcagagtgcatcaagccgtgatccgacgcatccagcagactctggtgctggag
caggcgtcccagggctccggtccccctgacctccgcatgcagtatctgtgccagatccaa
gccaatcacgagatgctgctaaaggacgtgcaggccctgcgggaccgtctgtgcctcggg
gacgacgccagtgccacggcggaaaagctcctgcacgtttacaggcagctgcgcaacccc
agcctcatcctgctgtga
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