Trachemys scripta elegans (red-eared slider): 117887396
Help
Entry
117887396 CDS
T07347
Symbol
TMC6
Name
(RefSeq) transmembrane channel-like protein 6
KO
K21988
transmembrane channel-like protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
117887396 (TMC6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tst02000
]
117887396 (TMC6)
03037 Cilium and associated proteins [BR:
tst03037
]
117887396 (TMC6)
Transporters [BR:
tst02000
]
Other transporters
Pores ion channels [TC:
1
]
117887396 (TMC6)
Cilium and associated proteins [BR:
tst03037
]
Other cilia and associated proteins
Stereociliary proteins
117887396 (TMC6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
117887396
NCBI-ProteinID:
XP_034645866
LinkDB
All DBs
Position
14:34441060..34467238
Genome browser
AA seq
795 aa
AA seq
DB search
MTQPFSVTLAVPESRDGASLDLSPCDEGAVHSSFQQLLQEQSMEGQELEMQELTLGGREN
LASDRTEAWEEPEARGEHPDFSSATLLILANMPSRTIGRSRGAIISQFYSRTTKLRRRSS
RPPLHQMSRSARPSLRQYDLELDSGHAEQKDTQSLLVKELQSLSSTQRSHMLQAMPVSLA
EKRSIRQELGGYRSTLRKPDRTRRPLSCCGQLKHGFLIGFRSLWDGFLSLLHSLQPWHHS
LKQISGRFGSSVLSYFLFLKTLLAFNVFLFLTLLIFVVATQAAYPPAAENSRLFTGLELL
TGAGYFTQTLMYYGYYSNFTLNDPCTPSSRSCQPDKGHLPYNMPLAYVFTIGVSFFMTCI
LLVYSMSRSFGESYRIGSTSGDFAIKVFCAWDHKVIQRRFVKLQNENIRTQLKELLGERR
SKSRPMSLCRKLGRMVVLSLAWAVSVGTVLGCVVAVYYFAEHMLQVHQDSQGRGSSEARQ
EALLLVLPMVVSLINLVMPYLYNLLAAWEKQESPALEVYVAICRNLILKMVVLGLLCYHW
LSRKMGYSSENKCWETSVGQELYRFVVMDFMFTLLDTFLGELLWRLILEKKLMRKQRPEF
DIARNVLELIYGQTLTWLGVLFCPLLPAVQILKLLLLFYIKKTSLMKNCQSPSKLWCASH
MSTVFITLLCFPSFLGAAIFLSYTIWAVRPSRVCGPFRTQETIYESGKTWIQELEKSSPN
ITWFTWIHQHLVENTFFLFFVSGVLLAVIYLHIQVVKGHRRIIRLLKEQIAHEGEDKVFL
IQKLQCIYGKQETRP
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgacccagccattctccgtcacccttgctgttccagagagcagggacggtgccagcctg
gatctgagcccgtgcgatgagggcgctgtgcacagttccttccagcagctcctccaggag
cagagcatggaggggcaggagctggagatgcaggagctgacccttgggggcagagagaac
ctggcatccgatcgcaccgaggcctgggaggagccagaggcgaggggagagcacccggat
ttctcttcagccacgctgctgatccttgccaacatgcccagccgcaccatcgggcgcagc
cgaggagccatcatctcgcagttctacagccgcacaaccaagcttcgccgccggagcagc
cggccgccgctgcaccagatgtcccgctctgcacggcccagcctgcggcagtacgacctg
gagctggactccggccacgcagagcagaaagacacacagagcctgctggtgaaggagctg
cagagcctctcgagcacccagaggagccacatgctgcaggcgatgcccgtgagcctggca
gagaaacgcagcatcaggcaggagttgggtggatacagaagcaccctgaggaaacctgac
aggaccaggaggcctttgtcctgctgtggccaactcaaacatggcttcctcatagggttc
cggagtctctgggatgggttcctctccctcctccactccctccagccctggcatcattcc
ctgaagcagatcagcggccgcttcggctccagtgtcttgtcctacttcctcttcctcaag
acgcttctcgcgttcaacgtcttcttgtttctgactctcttgatcttcgtggtagccacg
caggctgcgtaccccccggccgccgagaacagcaggctcttcacggggctcgagctcctt
actggggcgggctacttcactcagactctgatgtactacggctactacagtaacttcacc
ctgaacgacccctgcacccccagcagcaggagttgccagcctgacaaaggccatctccca
tacaacatgccgctggcctacgtgttcaccattggggtctccttcttcatgacatgcatc
ctgctggtgtacagcatgtcccgatcctttggtgagagttaccgcataggcagcacgtcg
ggggactttgccatcaaagtgttctgcgcctgggaccacaaggtgatccagagacgcttc
gtcaagctgcagaacgaaaacatccggacacagctgaaggagctgctaggagagcggcgg
tctaagtcccgcccaatgagcctgtgcaggaagttgggcaggatggtggttctcagtctg
gcctgggcagtgtccgtgggcaccgtcctaggctgtgtcgtcgcagtgtattacttcgcc
gaacacatgctccaggtgcaccaggacagccaaggcagggggagcagcgaggcccggcaa
gaagccctcctgctggttctgcctatggtggtgtctctgatcaacctggtgatgccgtac
ctgtataacctgctggcagcctgggagaagcaggagtctccagcgctggaggtgtacgtg
gccatctgcaggaatttgattctgaagatggtcgtcctgggcctgctgtgttaccactgg
ctgagtcggaagatgggatactcctcagagaacaagtgctgggagacgtcggtggggcag
gagctgtaccgctttgtggtgatggatttcatgttcacgctcctggacactttccttggg
gagctgctctggaggctcatcttggagaagaagctgatgaggaagcagaggcctgagttt
gacattgcccggaacgtgctggagctgatctatgggcagaccctgacctggctgggggtt
ctcttttgccccctcctcccagccgtccagatcctcaagctgctgctcctgttttatatc
aagaagaccagcctgatgaagaactgccagtctcccagcaagctgtggtgtgcatctcac
atgagcacagtcttcatcaccctcctgtgcttcccctcattcctgggcgccgccatcttc
ctctcctacaccatctgggcagtgagaccatccagagtgtgtggcccgttccggacgcag
gagaccatctacgagtcagggaagacttggattcaagagctggagaaatccagcccaaac
atcacctggttcacctggatccaccaacacctggtggaaaacaccttcttcctgttcttt
gtgtctggagtcctgctagctgtgatctacctccacatccaggtggtgaaaggccatcgt
agaatcatccgcctgctgaaggaacagattgcccatgaaggggaggataaggtatttctc
attcagaagctgcagtgcatttatgggaagcaagagacccgcccctga
DBGET
integrated database retrieval system
