Trachemys scripta elegans (red-eared slider): 117887449
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Entry
117887449 CDS
T07347
Symbol
RHBDL3
Name
(RefSeq) rhomboid-related protein 3 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tst01002
]
117887449 (RHBDL3)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
117887449 (RHBDL3)
Peptidases and inhibitors [BR:
tst01002
]
Serine peptidases
Family S54: Rhomboid family
117887449 (RHBDL3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_6
EF-hand_1
DUF5580_M
EF-hand_8
EF-hand_11
AIF-1
EF-hand_9
EH
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
117887449
NCBI-ProteinID:
XP_034645979
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Position
14:26433747..26558782
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AA seq
407 aa
AA seq
DB search
MGDRRPETHASSSPAVAASSEAEEIEVLESEDVLPMATEDHWKALFDQFDPESTGYISTE
KFRNLLQRHGSELDPHKLEVLLALADNNSDGKICYQDFVNLMSNKRSNSFRQAILQGNRR
LCSKALLEESGLSLSQRLIRHVAYETLPREIDRKWYYDSYTCCPPPWFMIAITIVEVAFF
LYNGVVLDRFVLQVTHPLYLKNSLVYHPQLRAQAWRYLTYIFMHAGIEHLGLNVVLQLLV
GVPLEMVHGAARIGFVYIAGVVAGSLAVSVADMTAPVVGSSGGVYALISAHLANIVMNWS
GMKCQFKLLRMALALICMSFEFGRAVWLRFHPSAYPPCPHPSFVAHLGGVLVGITLGVVI
LRNYEQRLQDQSLWWIFIFIYVVFVLFAIFWNVFAYNLLDLKLPPPP
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgggagacaggcggccggagactcacgccagctcttcccctgccgtggctgccagctcc
gaggcagaagaaatagaggttttggagtcggaggatgtcttgcctatggccacagaggat
cactggaaagctctgtttgatcagtttgaccccgagagcactggctacatcagcactgag
aaattccgaaacctcctccaaagacacggctctgagctggacccacacaaactggaggtg
ctcttggccttggcagacaataattcagacgggaagatctgttaccaggacttcgtcaac
ctgatgagcaacaaaaggtccaatagcttccgccaagccattctgcaggggaacaggagg
ctgtgcagcaaggcactgctggaggagtcaggactaagcctgtcccagaggctaattcga
cacgttgcgtatgagaccctgccacgcgagatagaccggaagtggtactacgacagttac
acctgctgtcctccaccctggttcatgattgccatcaccattgtagaggttgcctttttt
ctttacaacggagtggtattagacagatttgtgctgcaagtcacccatcctttatacctg
aagaactcattagtgtatcatcctcagctccgtgctcaggcttggaggtacctaacctac
atattcatgcatgccgggatagaacaccttggactcaatgttgttcttcagcttctggtt
ggggttccccttgaaatggtacatggagcagcaaggattggcttcgtctacattgctgga
gttgtagcaggttccctggcggtatcggtagctgacatgactgcgccagtggtgggttcc
tctggaggggtttatgcgctcatttctgctcatctggccaacatagtaatgaactggtct
ggaatgaagtgccaattcaagctgctgcgcatggctcttgcgttgatctgtatgagcttt
gaatttggaagggctgtgtggctgcggttccatccatctgcttaccccccatgtccacac
ccaagcttcgtcgcccacctgggtggggtattggttggaatcacattgggcgtggtcatc
ctaaggaactatgagcagagactccaagaccagtccttatggtggatctttatttttatt
tatgtcgtctttgtattgttcgccatcttttggaatgtttttgcctacaatctgttggat
ctgaagctacctccacctccttga
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